| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4716 |
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| Symbol | |
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| ID | 6130958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 5189072 |
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| End bp | 5190757 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641644858 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001771486 |
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| Protein GI | 170742831 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.959774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG AATACGATTT CATCATCGTC GGTGCCGGCT CGGCCGGAAA CGTGCTGGCC
GCCCGGTTGA CCGAGGACGC GGACGTCAGC GTCCTGCTCC TGGAGGCGGG TGGTCCCGAC
TACCGCTTCG ACTTTCGCAC CCAGATGCCA GCGGCGCTCG CCTATCCACT CCAGGGGCGG
CGCTACAACT GGGCGTATCT CACCGATCCG GAGCCTCACA TGAACAACCG GCGCATGGAG
TGCGGCCGGG GCAAGGGGCT CGGCGGCTCG TCGCTGATCA ACGGCATGTG CTACATCCGC
GGCAATCCCC TCGACTACGA CGGCTGGGCG CGATTGCCCA GCCTCGCGGA CTGGTCCTAC
GGCGATTGCC TGCCGTACTT CCGCAGGGCG GAGACACGCG ACCTTGGGCC GGACACCTAT
CACGGCGGAG ACGGACCGCT CTACGTCACC GCGGCCAAGC CCGGCGGAAA CGTTCTGTTC
GAGGCCATGA TCGAGGCCGG CGTGCAGGCG GGCTACCCCC GCACCGCGGA CCTCAACGGC
TACCAGCAGG AAGGCTTCGG TCCGATGGAC AGGAGCGTCA CCGCGAAGGG ACGCCGGTCA
AGCACCGCCC GGGGCTACCT CGACCAGGCG CGGGAGCGGC CCAACCTCAC TATCGTCACC
CACGCACTCA CCGACCGCAT CCTGTTCAAT GGCAAACGCG CGAGCGGCGT CGTCTATCTG
CGCGGGAACA AGGAGCCGTC CTTTGCGCGG GCACGCCGCG AGGTGCTGGT CTGCTCCGGC
GCGATCGCCT CGCCGCAGAT CTTGCAGCGC TCCGGCGTCG GGCCTGCCAA TCTCCTGCGC
AATCTCGACG TCCCCCTCGT TCTCGACCTG CCCGGCGTCG GCGAGAACCT GCAGGACCAT
CTTGAGATGT ACGTGCAATA CGAGTGCCGG CAGCCCGTCT CCCTGGCACC CGCCCTCAAG
CCCTGGAACC AGCCCGCCAT CGGCGCGCGA TGGCTGTTCG CGGGGACGGG GATCGGCGCA
AGCAACCAGT TCGAAGCGGG CGGCTTCATC CGCTCCGACT CCGAATTCGC CTGGCCGAAC
TTGCAATATC ACTTCCTACC GCTGGCGATC AGCTACAACG GCAGCCACGC GGTGAAATCG
CACAGCTTTC AGGCCCATGT CGGCTCGATG CGCTCACCGA GCCGGGGTCG GATCCGGCTC
ACTTCGCGGG ACCCGCACGC CCATCCGAGC ATCCTGTTCA ACTACATGTC GGCCGACCAG
GACTGGCGCG AGTTCCGCGT TGCGATTCGG ATCACCCGCG AGATCATGGC CCAGCCGGCC
CTTGATCCGT ACCGCGGGCG CGAGATCAGC CCAGGCGCGG CGCTACGTTC CGACGCGGAG
CTCGACGCCT TCGTGCGCGC CCATGCCGAG ACCGCCTACC ACCCTTCCTG TTCCTGCAAG
ATGGGCGAGG ATGCGATGGC GGTGGTCGAC GGCCGGGGCC GGGTGCATGG GCTGGAGGGT
CTGCGCGTGG TCGACGCCTC GATCATGCCG CAGATCGTCA CGGGCAACCT CAACGCCCCG
ACGATCATGA TCGCGGAGAA GATCGCCGAC GACATTCGCG GCCGGACCCC CCTGCCGCGC
AGCCAGGCAG CCTATTTCGT GGCCGGCGAT ACGCCGCCGC GGAGGAGGCC GGTTCGCGCA
AGCTGA
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| Protein sequence | MTQEYDFIIV GAGSAGNVLA ARLTEDADVS VLLLEAGGPD YRFDFRTQMP AALAYPLQGR
RYNWAYLTDP EPHMNNRRME CGRGKGLGGS SLINGMCYIR GNPLDYDGWA RLPSLADWSY
GDCLPYFRRA ETRDLGPDTY HGGDGPLYVT AAKPGGNVLF EAMIEAGVQA GYPRTADLNG
YQQEGFGPMD RSVTAKGRRS STARGYLDQA RERPNLTIVT HALTDRILFN GKRASGVVYL
RGNKEPSFAR ARREVLVCSG AIASPQILQR SGVGPANLLR NLDVPLVLDL PGVGENLQDH
LEMYVQYECR QPVSLAPALK PWNQPAIGAR WLFAGTGIGA SNQFEAGGFI RSDSEFAWPN
LQYHFLPLAI SYNGSHAVKS HSFQAHVGSM RSPSRGRIRL TSRDPHAHPS ILFNYMSADQ
DWREFRVAIR ITREIMAQPA LDPYRGREIS PGAALRSDAE LDAFVRAHAE TAYHPSCSCK
MGEDAMAVVD GRGRVHGLEG LRVVDASIMP QIVTGNLNAP TIMIAEKIAD DIRGRTPLPR
SQAAYFVAGD TPPRRRPVRA S
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