Gene M446_4709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4709 
Symbol 
ID6132218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5179880 
End bp5181220 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content66% 
IMG OID641644852 
Productpolyhydroxyalkanoate depolymerase, intracellular 
Protein accessionYP_001771480 
Protein GI170742825 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTACC TCATGCGTGA GTCGTGCGAA CTGATGCTCA CGCCAGCCCG CGTCGCCGCA 
GACCTCGCGA AGCTCGCGTG CGAGAACCCG CTCAACCCTC TCACCTACAC GGTAGCCGGC
CGTTCGATTG CGGCCTCGTG TGAGATCTTC GAGCGGGCCA CCCGCTCCTA TCCCAAACCC
GCCTTCGGCC TGCCGGCCGC GGAGCGGATC GTGTGGGAGC AGCCCTTCTG CCGGGTCATC
GCCTTCGGCG AGCCGTGTGA CAAGCCCAAG CTGCTGCTCG TGGCTCCCAT GTCGGGCCAC
TACGCGACCC TGCTGCGGGG TACGGTGGCG GCCTTCCTCG ACACGCATCA GGTGTTCATC
ACCGACTGGA CCGACGCCAA GCAGGTGCCG CGCGCGGCCG GGCGCTTTGG GCTGGACGAG
TACATCGACT ACTGCATGGC GATGTTCGCG GCGCTCGGGC CGGACCTGCA CGTCATGGCG
GTCTGCCAGC CCTCGGTGCC CGTCCTGGCC GCCATTGCCC GCATGGAGGC CGAGAACCAC
CCCCTGGTTC CCCTCTCGGC GACGCTCGCG GGTGGTCCGA TCGACACCCG TCGCTCTCCG
ACCGCGGTGA ATGAACTGGC GCGGGAGCGC GGCATCACGT GGTTCCGGCA GCACTGCATC
CATGCCGTGC CGCCGAGCCA TCCGGGCAAC GGCCGCGCGG TCTACCCGGG CTTCCTTCAG
CTGGGAGGCT TCATGGGTAT GAACCTCGAC CGCCACCTGA CCGCCCACTG GGACATGTTC
AACCATCTCG TCGAGGGTGA CGGCGACTCC GCGGCCAAGC ACCGGGCCTT CTACGACGAG
TACCTCGCCG TGATGGACCT CACCGCCGAA TTCTACCTTG AGACGGTCGA GCAGGTGTTC
ATCAGCCACC GGCTCCCGCG GGGTGAGATG CAGCATCGCG GCAAGGCCGT CGACCTCGGA
GCGATCCGCC GCTGCGCTCT AATGGCGGTG GAGGGCGAGA AGGACGACAT CACGGGCGTC
GGACAGACGC TGGCGGCTCT CGACCTCACG CCCAACCTGC CGCCCGAGAA GAAGGCGTAC
CATCTCCAGG CGGGAGCGGG TCACTACGGC ATCTTCAACG GCTCGCGCTT CCAGGCCGAG
GTTGTGCCGA AGATCAAGCA CTTCATGGAG AGCAGCAGCG AGCGGCCCGC TGAGCGGGGA
ACGACTTGCG AAGAGGCATC CACGCTCGGG CTCGATCAGG ACGAGGTCGA CGCTCTCAAT
CGATCCGTGG CGTTGATCGT GTACAAAGCC CCACACCACT ATCCTGTGGC TGGTACTCTG
CAAGTTGCGG GGCAGTCCTG A
 
Protein sequence
MMYLMRESCE LMLTPARVAA DLAKLACENP LNPLTYTVAG RSIAASCEIF ERATRSYPKP 
AFGLPAAERI VWEQPFCRVI AFGEPCDKPK LLLVAPMSGH YATLLRGTVA AFLDTHQVFI
TDWTDAKQVP RAAGRFGLDE YIDYCMAMFA ALGPDLHVMA VCQPSVPVLA AIARMEAENH
PLVPLSATLA GGPIDTRRSP TAVNELARER GITWFRQHCI HAVPPSHPGN GRAVYPGFLQ
LGGFMGMNLD RHLTAHWDMF NHLVEGDGDS AAKHRAFYDE YLAVMDLTAE FYLETVEQVF
ISHRLPRGEM QHRGKAVDLG AIRRCALMAV EGEKDDITGV GQTLAALDLT PNLPPEKKAY
HLQAGAGHYG IFNGSRFQAE VVPKIKHFME SSSERPAERG TTCEEASTLG LDQDEVDALN
RSVALIVYKA PHHYPVAGTL QVAGQS