Gene M446_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4689 
Symbol 
ID6129307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5159705 
End bp5160388 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID641644834 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001771462 
Protein GI170742807 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTTTG ACCTTGTCGG CGAGGTGCAG GCTGCTTCGC CTGTTCCTCC CGTGCTGCCG 
CCGTTCCTGC GCGACGATCT CGGCGGGCGG TTGCGCGCCG GCTACGCGGC CTTCGTGGCC
GAGCCGCAGC CCCGCGCCCT GCTCGATCTC GTCGCGCGGC TCGAGGACGC CCTGGCCCGG
GCCGAGGCGC CCCGTGACTC GTTCCGGGAC GAGCTTCTGG CCGCGATGCC GGCCCTGCGG
CTCTTCGCGA TGACCCTGGC GGCCGACGCG CATCAGGCCG AGGACCTCGT GCAGGAGACG
CTGCTGCGCG GCTGGCAGCA CCAGCAGCGC TTCCAGGCGG GCACCTGCCT GCGGGCGTGG
CTGTTCACCA TCCTGCGCAA CCAGTTCTAC ACGACGTGCC GCAAGCGGCG CCGCGAGGTC
GAGGATGCCG ACGGCAGCGC GGCGCAGCGC CTCGCGGTTC CGGCGGATCA GGACGACGGC
GTCGCGTTGC GGGAGACCTG GGAGCAGGTC GGCAGGCTGC CGGCGCACCA GCGCGAGGCG
CTGCTGCTCA CCGCCCTGCA GGGGCTCTCC TACGAGGCCG CCGCCCGCGT CATGGGCTGC
CGGGTGGGCA CGGCCAAGAG CCGCGTCAAC CGCGCCCGGA TCGCCCTGAC CGAGGCACTG
GGCGGCGAAC CCGCCCCGCC GTGA
 
Protein sequence
MPFDLVGEVQ AASPVPPVLP PFLRDDLGGR LRAGYAAFVA EPQPRALLDL VARLEDALAR 
AEAPRDSFRD ELLAAMPALR LFAMTLAADA HQAEDLVQET LLRGWQHQQR FQAGTCLRAW
LFTILRNQFY TTCRKRRREV EDADGSAAQR LAVPADQDDG VALRETWEQV GRLPAHQREA
LLLTALQGLS YEAAARVMGC RVGTAKSRVN RARIALTEAL GGEPAPP