Gene M446_4681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4681 
Symbol 
ID6133270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5152961 
End bp5153992 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID641644826 
Productextracellular solute-binding protein 
Protein accessionYP_001771454 
Protein GI170742799 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GTCGCACCAT CCTCGCCGGA GGCGCCGCCC TCGCGCTCGC CGGCACCCGC 
GCCCGGCCCG CCCTCGCCGA GACCTCCTCG ATCGTGGTCG GCACCTGGGG CGGCGATTAC
GGCGCGCTGC TGCAGCAGAA CATCGACATC CCGCTCGTCA AGCCGCTCGG GATCGAGGTC
TCGCAGGACA TCGCCAACAA CGATCCGCGC CGCACCAAGC TGATCTCGGA GAAGACCAGC
CGGCGCGGCA GCATGGACGT CGCCTGCATC AACGATATCG ACAGCTACGT GCTCAGCCAG
CTCGGGGTGC TGGAGATGGT GCCGGCCAGC GCGGTGCCGC GCCTGTCGGC GGTGCTGGAC
GTCTTCCGCA AGCCGCATTC GATCCCGCAT ATCTACTCGG CGCTCGTGGT GCTCTACAAC
CCGAGCAAGG TCAGCGCGCC GCCGAAGAGC TATGCCGACC TGTTCGACCC GAAGTACAAG
GGGCGGGTCG GCTTCTCGGA CATCCTCTAC AGCTACAACA TGGCCGGCGC CAATATCGGG
GCGGGCGGCA CCATGGGCGA CTTCGCCAAG GGCAAGGCGG CGCTGTTGGA CCTCAGGAAG
CTCGACCCCA AGGTCTACCC GTCGAACGAG GCCCTGGCGG CGGCGCTGAA ATCCGAGGAG
GTCTGGCTCG CGCCGATGTG GCTGGCGCGC GGCTTCATGT GGAAGCAGGC CGGCATCCCG
GTCGAGATGG CGGTGCCCGA GGAGGGCGCG GTGCCGATCC TGTTCGAGGC CGGCGTGCCC
AAGAACTCGC GCGCCAAGGA CGGGGCCTTC AAGTACCTGA ACGCCATGCT CGACCCGCAG
GCGCAGGTCG CCTTCGCGGC CAAGATGGGC TACGTGCCGA CCGTGAAGGA CGCCAAGCTG
CCGGAGGATC TCGCCCGGCA GATCAGCCTG ACCGAGGCCC AGCAGGCCAA GCTCCACCCC
CTCGACTACG CCTACATGCA GCAGCAGCAG GCCGCCTTCA CCGACTTCTG GAACAAGGAG
TTCAAGGCCT GA
 
Protein sequence
MITRRTILAG GAALALAGTR ARPALAETSS IVVGTWGGDY GALLQQNIDI PLVKPLGIEV 
SQDIANNDPR RTKLISEKTS RRGSMDVACI NDIDSYVLSQ LGVLEMVPAS AVPRLSAVLD
VFRKPHSIPH IYSALVVLYN PSKVSAPPKS YADLFDPKYK GRVGFSDILY SYNMAGANIG
AGGTMGDFAK GKAALLDLRK LDPKVYPSNE ALAAALKSEE VWLAPMWLAR GFMWKQAGIP
VEMAVPEEGA VPILFEAGVP KNSRAKDGAF KYLNAMLDPQ AQVAFAAKMG YVPTVKDAKL
PEDLARQISL TEAQQAKLHP LDYAYMQQQQ AAFTDFWNKE FKA