Gene M446_4651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4651 
Symbol 
ID6134812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5119744 
End bp5120472 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID641644796 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionYP_001771425 
Protein GI170742770 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.198093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.693925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC TGGACCGGGA ATTCCTGCAG CGCGACCGGC GCATCCACCC GCCGGCCTAC 
ACGCCGGATT ACAAGACGAG CGTGCTGCGC TCGCCGCAGC GGGCCTTGAT CTCGCTGCAA
TCGTCGCTGT CGGAGGTGAC CGGCCCGGTC TTCGGCCAGG GCGAGCTCGG CCCGCTCGAT
AACGACCTGA TCCTCAACTA CGCGAAGGAC GGCGAGCCGG TCGGCGAGCG CATCCTCGTG
CACGGCCTCG TGCGCGACGA GAACGGCCGC GGCGTGCCCC ACACCCTGGT CGAGTTCTGG
CAGGCCAATG CGGGCGGGCG CTACCGCCAC CGCAACGACC GCTACCTCGC GCCGATCGAC
CCGAATTTCG GCGGCTGCGG CCGGGCGCTC ACCGACGAGA ACGGCTACTA CTACTTCCGC
ACCATCAAGC CCGGACCATA TCCGTGGCGC AACTTCCTGA ACTCGTGGCG CCCGGCCCAC
ATCCACTTCT CGGTGTTCGG CTCCGGCTTC GCCCAGCGCC TGATCACCCA GATGTATTTC
GAGGGCGACC CCCTGATCTG GCGCGACCCG ATGGTGCTGG GCATCCCCGA CCGCGCCGCG
GCCGAGCGGC TGATCGCGCC CCTCGACCTC GAATCCGCGG TGCCGCTCGA CATGCTGGCC
TACCGCTTCG ACATCGTCCT GCGCGGGCGC CAGCAGACGC TCTTCGAGAA CAAGCTGCAG
GGGAATTGA
 
Protein sequence
MTALDREFLQ RDRRIHPPAY TPDYKTSVLR SPQRALISLQ SSLSEVTGPV FGQGELGPLD 
NDLILNYAKD GEPVGERILV HGLVRDENGR GVPHTLVEFW QANAGGRYRH RNDRYLAPID
PNFGGCGRAL TDENGYYYFR TIKPGPYPWR NFLNSWRPAH IHFSVFGSGF AQRLITQMYF
EGDPLIWRDP MVLGIPDRAA AERLIAPLDL ESAVPLDMLA YRFDIVLRGR QQTLFENKLQ
GN