Gene M446_4643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4643 
Symbol 
ID6129368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5104271 
End bp5106793 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content73% 
IMG OID641644782 
ProductABC transporter related 
Protein accessionYP_001771417 
Protein GI170742762 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.343173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0984598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA CCGATCGGCT CGCGCTCCCC CTCCTGGCGC TCGCCCTCGT CGTCCTGCCG 
CTCGGCCTGC AGGGGCTCGG CCTCACCCTG ACCACGGCCA CCGACGTGGT GGTCTTCGCG
GTGGCCTGCC TGGGCCTCAA CATCCTGGTC GGGCAGACCG GCCTCGTCTC CTTCGGGCAC
GGCGCCTTCT TAGGCCTCGG CGCCTACGCG GCGGCGATCA GCCAGCGCGC CCTCTTCCCC
GGCGGCCTCG TCGCGCCGGC CGTCTTCGCC CTCGCCTTCG TGGCCCTCGC CGCCCTCCTC
GTCGGCCTGC TGATCCTGCG CCGCCGGGGC GTCTACTTCT CGCTGCTGAC GCTGGCCCTC
TCGGCGCTGA CCTTCACGGT GGCCTATCGC TGGACGGCGC TGACCGGGGG CGAGAGCGGC
TTCGGCGGCG TGGTGCGGCC CTCCCTGCTC GGCATCGACC TCGACGCCCC GGCGACGTGG
TACGCCTGCG TGGCGGTCGT CGGCTTCGCG GTGCTCTGCG GGCTCGCGCG GCTGCGCCGC
TCGGCGGTCG GCAGCGTGCT GGAGGCGATC CGCGAGAACG AGCAGCGGGC CCGCTTCCTC
GGCTACCCCA CCGCCCGCTA CAAGCTCCTC GCCTTCACGA TCTCGGCGGC GGTGACGGGC
CTCGCGGGCG TGCTCGAGGT CTTCACCCAC CGCTTCGCCT CGGCCGAGCC GCTCGGCACC
GCCTTCTCGG GCGAACTCCT CGCCATGGTG GTGATCGGGG GCATGCGCAG CCTCGCCGGC
CCGGCGATCG GCGCGCTGTT CTTCATCCTG TTTCGGGAAC TGCTCTCGAT CTGGACCGGC
GACTGGCTGT TCTGGTTCGG CCTCCTGTTC ATCGGCTTCA TCCTGTTCTC GCCGGACGGG
CTCGTCGGCA TCGGCCGGCG GGTGCTGCGC CTGATCCGGC CGGCCCCGAG CGAGGACGCC
GCGATGGCCG GCCGGCGGGC CGGCGCCCCC GAGAACCTGC CCGGCTTCCT GCGCCCGGAC
GGGGCGGTCG CGGGCGCGAT CCTGCGGGCG AGCGGCATCG CCAAGCGCTT CGGCGGCATC
CGGGCGGTGG AGGACGTCTC GATCGCGGTG CGCGACCGGA CGCTGCACGC CCTGATCGGC
CCGAACGGCG CCGGCAAGAC CACGGCCTTC AACCTGATCT CCGGGATGTT CCGGCCCGAT
GCCGGCGACG TGACCCTGGA GGAGCGCTCG ATCGCGGGGC TCGCCCCCGA GCGGATCTGC
CGGGCCGGCC TCGGCCGCTC CTTCCAGATC ACCAACCTGT TTCCGGCGCT GAGCGTCGAG
GAGAATGTCC GCCTCGCGGT CCAGAGCCGG CATCCCGGCC GCTTCAATCC CTGGCGCGAC
GCCCGCCGGG ACCGGGCGGT GGCCGCGGAG ACGGCCGAGA TCCTGCGCTG GCTCGGCCTC
GCGGGGCTGG AGCGGACGGA GGCCGGCTCC CTCTCCTACG GCGGCCAGCG CCTCCTCGAC
ATGGGAGTGG CGCTCGCCAC CAAGCCCCGC GTGCTCCTCC TCGACGAGCC GCTCGCCGGC
CTCGCGGCGG CCGAGCGCGG GCGCATCGGC GACATCATCA AGCGGGTCTC GACGGAGGTG
CCGGTCTTGA TGGTCGAGCA CGACATCGAC CGGGTCTTCC AGATCGCCGA CGCCGTCACG
GTGATGAACG AGGGCCGCGT CCTCGTCGAC GGCACCGTCG AGGAGGCCCG CACCAGCCCG
GCGGTGCAGG AGGTTTATAT CGGCTCGGGC ACCGCCGCGA TCGCCGCCAA GCCCCGCCCG
AGCGCCGCGG GCGGAGGCAC GCTCCTCTCC CTTGATCAGG TCGACACGTT CTACGGCAAG
AGCCACATCC TCAACGGCGT CACCTTCGCG GTGCACGAGA ACGAGATCGT GGCGCTGCTC
GGCCGCAACG GCGCCGGCAA GTCGACCTGC CTCAAGACGG TCACCGGGAT CGCGCCCCAC
GCCGCCGGCC GGATCCGCCT CGCCGGCGAG AGCCTCGACG GGCGCTCGGC CGCCGCCATC
GCCCGGGCCG GCATCGGCTA CGTGCCGCAG GGCAGGGGGC TCTTCGCGGG CATGAGCGTC
GCGGAGAATC TCGAACTCGG CCGGCTGCGG CGGCGCACCG GGCACGGCGT GCACTGGGAC
GAGGAGCGCA TCCTCGCCTA TTTCCCGCGC CTGCGCGAGC GCTGGCGCAC CCCCGCCGAC
TACCTGTCGG GCGGCGAGCA GCAGATGGTG GCGGTGGCCC GCGCCCTCTC GGGCGACACC
CGCGTGCTCC TGCTCGACGA GCCCTTCGAG GGCTTGGCGC CGGCGATCGT CGAGAGCCTG
TTCGAGACCT TCGACGCCCT GCGCCGCGAG GTCTCGATCG TCATCGTCGA CCACAACCTC
GACCTCGCCC TGGCGCTCTC CGACCGGACC GTCGCGCTGG AGCGCGGCCG CGTCATGCAT
GTCGGCCCGT CGCGCGCGCT GCGCGACGAC TTGGCCCTGC GCCGCCAGGT GCTGTGGCTG
TAA
 
Protein sequence
MTRTDRLALP LLALALVVLP LGLQGLGLTL TTATDVVVFA VACLGLNILV GQTGLVSFGH 
GAFLGLGAYA AAISQRALFP GGLVAPAVFA LAFVALAALL VGLLILRRRG VYFSLLTLAL
SALTFTVAYR WTALTGGESG FGGVVRPSLL GIDLDAPATW YACVAVVGFA VLCGLARLRR
SAVGSVLEAI RENEQRARFL GYPTARYKLL AFTISAAVTG LAGVLEVFTH RFASAEPLGT
AFSGELLAMV VIGGMRSLAG PAIGALFFIL FRELLSIWTG DWLFWFGLLF IGFILFSPDG
LVGIGRRVLR LIRPAPSEDA AMAGRRAGAP ENLPGFLRPD GAVAGAILRA SGIAKRFGGI
RAVEDVSIAV RDRTLHALIG PNGAGKTTAF NLISGMFRPD AGDVTLEERS IAGLAPERIC
RAGLGRSFQI TNLFPALSVE ENVRLAVQSR HPGRFNPWRD ARRDRAVAAE TAEILRWLGL
AGLERTEAGS LSYGGQRLLD MGVALATKPR VLLLDEPLAG LAAAERGRIG DIIKRVSTEV
PVLMVEHDID RVFQIADAVT VMNEGRVLVD GTVEEARTSP AVQEVYIGSG TAAIAAKPRP
SAAGGGTLLS LDQVDTFYGK SHILNGVTFA VHENEIVALL GRNGAGKSTC LKTVTGIAPH
AAGRIRLAGE SLDGRSAAAI ARAGIGYVPQ GRGLFAGMSV AENLELGRLR RRTGHGVHWD
EERILAYFPR LRERWRTPAD YLSGGEQQMV AVARALSGDT RVLLLDEPFE GLAPAIVESL
FETFDALRRE VSIVIVDHNL DLALALSDRT VALERGRVMH VGPSRALRDD LALRRQVLWL