Gene M446_4642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4642 
Symbol 
ID6129471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5103330 
End bp5104256 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content76% 
IMG OID641644781 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001771416 
Protein GI170742761 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.130782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACG TCGCCCTCGT CGGAGCCGGC CTGATCGGCC GCTCCTGGGC CGTGGTCTTC 
GCCCGGGCCG GGTTCCGGGT CCGCCTCACC GACCGGGATC CGGCCGCGCG CGAGGCCGCG
CCGGGCCATA TCGAGGCGGC CCTGCGGCAG CTCTCCGCCC ACGGCCTCGT CGCGGACGTC
CCGGGCGCCC TCGCGCGCGT CAGCTGCCAC GCGGCCTTGA ACGAGGTGGT GGCGGGGGCC
GACCTCGTCC AGGAGAGCGG GCCCGAGACC GTCGAGGCCA AGCGCGCGCT GTTCGCCGAG
CTCGACGCGC TCTGCCCGCG CGAGACCATC CTGGCCTCCT CGACCTCGGC GATCGTCGCC
TCCCTCTTCA CCGAGGGCCT GCCCGGCCGC GGCCGCTGCC TCGTGGCGCA CCCGGTCAAC
CCGCCCCACC TCGTGCCGGT GGTGGAACTC TGCGGCGCGC CCTGGACCGA TCCGGCCGCG
ATCTCCCGCG CCCGCGCCCT CTACGAGGCG GCGGGGCAGG TGCCCGTGAC CGTGCACCGC
GAGGTGGAGG GCTTCGTCCT CAACCGGCTG CAGGGGGCGC TGCTGTCGGA GGCCTTCCGC
CTCGTCGCCG AGGGCGTGGT GAGCCCGGAG GATCTCGACA AGACGGTCTC GGAGGGGCTC
GGCCTGCGCT GGTCCTTCCT CGGCCCCTTC GCGACGATCG ACCTCAACGC GCCCGGCGGC
GTGCCCGACT ACGCCGCCCG CTACGGCGGA TTCTACCGCC GCCTCGCCGC CGACCCGGCC
CCGCCCCAGG TCTGGGAGGC GGAGAGCCTC GCGCGGATCG CGGCCGCTTG GCGAGGCGGT
CCCGATCCGG CGAGCCAAGC CGAGCGCGCG CGCCGCCGGG ACGCCCGCTT GGCCGCCCTG
ATGGCGCACA AGCGCGCCCA ATCCTGA
 
Protein sequence
MPNVALVGAG LIGRSWAVVF ARAGFRVRLT DRDPAAREAA PGHIEAALRQ LSAHGLVADV 
PGALARVSCH AALNEVVAGA DLVQESGPET VEAKRALFAE LDALCPRETI LASSTSAIVA
SLFTEGLPGR GRCLVAHPVN PPHLVPVVEL CGAPWTDPAA ISRARALYEA AGQVPVTVHR
EVEGFVLNRL QGALLSEAFR LVAEGVVSPE DLDKTVSEGL GLRWSFLGPF ATIDLNAPGG
VPDYAARYGG FYRRLAADPA PPQVWEAESL ARIAAAWRGG PDPASQAERA RRRDARLAAL
MAHKRAQS