Gene M446_4607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4607 
Symbol 
ID6133829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5065132 
End bp5066088 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content74% 
IMG OID641644746 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001771381 
Protein GI170742726 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0567423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CCTTCGCGCA GGTCGAGGCC GCCGCGCACC GCCTCGACGG CGTCGCCCAC 
CGCACGCCCG TCCTCACCTC GCGCACGGCC GACCAGCGCA CGGGCGCCCG CCTGTTCTTC
AAGGCGGAGC CGCTGCAGCG CGCCGGCGCC TTCAAGTTCC GCGGCGCCTA CAACGCCATC
GCGGCCCTCG ACGCGGCGGC GCGGCGGCGC GGCGTGCTGG CCTTCTCGTC GGGCAACCAC
GCGCAGGCCA TCGCCTATGC GGGGGCGCTG CAGAACGTCC CGACCGTGAT CGTGATGCCG
CACGACGCGC CGGCCATCAA GGTCGCGGCG ACGGCGGGCT ACGGCGCCGA GATCGTGCGC
TACGACCGCT ACAAGGAGGA TCGCGAGGCG GTGAGCCGCG GGATCGCCGA GGCGCGCGGC
CTCACGCTGA TCCCGCCCTA CGACCACCCG GAGGTGATCG CCGGCCAGGG CACCGCCGTG
AAGGAGCTCC TGGAGGAGAC GGGGCCCCTC GACGTGCTCC TGGTCTGCCT GGGCGGCGGT
GGGCTGCTCG CGGGCTCGCT GCTCTCGGCC CGCGCCCTGG CGCCGGATTG CGCCGTCTAC
GGCGTCGAGC CGGAGGCCGG CAATGACGGG CAGATGTCGC TCGCCAAGGG CGAGGTCGTG
CGCATCCCGG TCCCGGTCTC GGTCGCCGAC GGGGCGCTCA CCACGCATCT GGGCGCGCAC
ACCTTCCCGA TCATCCGCCG GGAGGTGACC GGGCTCGTCA CCGTCTCGGA CGCGCAGCTC
GTGGCGGCGA TGCGCTTCTT CGTGGAGCGG ATGAAGCTCG TGGTCGAGCC GACCGGCTGC
CTCGCGGCGG CGGCGGCGTT CGAGGGCGTG GTGCCGGTCG CCGGCAAGCG CGTCGGCGTG
GTGCTCTCGG GGGGCAACGT GGATCCGGCG GCCCTCGCCC GCTTCCTCGC CGCATGA
 
Protein sequence
MTITFAQVEA AAHRLDGVAH RTPVLTSRTA DQRTGARLFF KAEPLQRAGA FKFRGAYNAI 
AALDAAARRR GVLAFSSGNH AQAIAYAGAL QNVPTVIVMP HDAPAIKVAA TAGYGAEIVR
YDRYKEDREA VSRGIAEARG LTLIPPYDHP EVIAGQGTAV KELLEETGPL DVLLVCLGGG
GLLAGSLLSA RALAPDCAVY GVEPEAGNDG QMSLAKGEVV RIPVPVSVAD GALTTHLGAH
TFPIIRREVT GLVTVSDAQL VAAMRFFVER MKLVVEPTGC LAAAAAFEGV VPVAGKRVGV
VLSGGNVDPA ALARFLAA