| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4577 |
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| Symbol | |
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| ID | 6129435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 5033369 |
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| End bp | 5035762 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641644717 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001771352 |
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| Protein GI | 170742697 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00450628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGACA TCATCGCCTG TCTCACGCAG CAGCACGACC CGCGCCTGAT CGTCGTGGCG
GCGCTGATCT GCGCGGTCGG CTGCTACGCG ACCTTCGCGC TCGGGCGGCA GACCTTCCGG
GCGTCGGGCC GCGAGCGGAT CGGCTGGGCG GCGGCGGCGG TCCTCACCAC CAGTTCGGCG
ATCTGGGCCA CCCACTTCAT CGCCATGCTG GCCTTCGCGC CCGGGATGGC CTTCGGCTTC
GCCCTGGCGC CCACCGTCGC CTCCTTCGCG GTCGCGGTGA TGCTGGTGAG CCTCGCGGCC
CTGGCGATCG TCGGCAGCCG GACGCGGCAC GGGGCGGTCG CGGGCGGCGC GCTCATCGGG
CTCGCGATCG CCGGCATGCA CTATACCGGC ATGGCGGCCT ACCGGGTCCA GGGCACGATC
GCCTGGGACG GGCAGCGGGT GGCCGTGTCG GTCCTCGCCG GAATCGCCCT GTCGGTCCTG
GCGCTGCGGC TCTCCCTGGC GCCGCAGCGC CTCGCGCGCG CCCTCGCGCC GCTCGCTCTG
CTGCTCGCGG TCTGCGGCGC GCATTTCATC GGCATGGGCG CCCTGTCCCT GCGCTACGAC
CCGCGCATCG CGCTGCCGGA CGGCTCCCTC GACGCCGCCG TGGTGACGAT CCTCACGGCC
AACGCGGCCT TCCTGATCCT CGGGGCGGCG CTGGCGGCAC TGCGCCTGAG CATCCTCAAC
CACCGGCGCC GGGTGGCGGA GCGCCAGCGC CTGCGCGACC TCGCCGACAT CGCCGTCGAG
GGATTGCTGA TCTGCGACGA CGACGCGATC GTCGGCGTGA ACCGGAGCAT CGAGCGCATC
CTCGGCCGGG GCCGCGAGGA GGTGATCGGC CGCGCCCTGC CGGACCTGCT GCCGGGCCTG
TCGGCCGCGG CGATCCCGCT CACCCACGAG CGCGATGCGA CCTTGCGCGA CGCGAGCGGG
GCGGAGATCC CGGTGCGGGT CATCGCCCAG ACCATCGCGA TCGAGACCAG ACCCCACCTG
GTGGTCGCGG TGCGCGACCA GCGCGACCGC CTGCGGGCCG AGGCGGCGAT TACCCACTTG
GCGCATCACG ACGCGCTCAC GGGCCTCGCC AACCGCCTGC GCTTCAACGG CGTCCTGGCC
GAGCTCCTGG CCGAGCGCTT CGCCGCGCGG CGGCACGACC CGGCGCCCTT CGCGCTGCTG
ATCCTGGACC TCGACCGCTT CAAGGCCGTC AACGACACGC TCGGGCACGG GATGGGGGAC
GACCTGCTGC GCCGGGTGGC GCAGCGCCTG CTGCGGGTGG TGGGCGCGGC CGACGTGGTG
GCGCGGCTCG GCGGCGACGA ATTCGCCATC CTGCTCGCCG GGGCGGGGGA TGCGGCGGGC
GCCGGCGACC TCGCGGCGAT CCAGGCGGCG GCCGAGCGGG CGATCGAGAT CCTGAGCCGC
CCCTTCGTGA TCGACGGACA CATCCTCGAC ATCGGCGCGA GCATCGGCAT CGCCCTCGCC
CCCCAGGACG GCGACACGCC GGAGCAGCTC CTGCGCAGCG CCGACCTCGC CCTCTACGGA
GCCAAGGAGG AGGGCCGCGG GCGCTTCCGG ATGTTCGAGG GCACCATGAA TGCCCGCATG
CAGGCCCGCC GCTCCCTCGA ACTCGACCTG CGGCGCGCCC TCGCGCGGCA GGAATTCGAA
CTCTACTTCC AGCCGCAGGT CGATGCCCGG ACCGGCCGCT TCGACGGGGC CGAGGCGCTG
ATCCGCTGGC ACCATCCGGA GCGCGGCCTC GTCTCGCCCG GGGAGTTCAT CCCGCTCGCG
GAGGAGACCG GACTGATCGG CCCGCTCGGC GAGTGGGTGC TGCGCACGGC CTGCGCCGAG
GCCCGCCGCT GGGCGACGCC CCTGCCGGTC GCGGTCAACC TCTCGCCGGT GCAGTTCCGC
GACCCCCGGC TCGCCGCCAC GGTCCGCGGC ATCCTGGCCG AGACCGGCCT CCCGGGCTCC
CGCCTGGAGA TCGAGATCAC CGAGGGGACG CTGATGCAGG ACGAGCACCG CACCCTGGCG
GTGCTGACGG AACTCCGGGG CCTCGGCATC CGGATCTCGA TGGACGATTT CGGCACCGGC
TATTCGAGCC TGAGCTACCT GCGCCGCTTT CCGTTCGACA AGATCAAGAT CGACCAGTCC
TTCGTGCGCC AGACGCCGCA GGACCGGGAC AGCGTCGCGA TCGTGCGCGC CATCGCGATG
CTCGGGCGCA GCCTCGGCAT CAAGACCACG GCCGAGGGAG TCGAGACCGA TCAGCAATCG
GTCTTCATCG CGGGCGAGGG CTGCGACCAG CTGCAGGGCT ACCTCTACAG CCGGCCGGTC
CCGGCCGAGT CCATCGCCGA ACTCTTTCGC GCGCCGCGCG CGCCGCGCGC CTGA
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| Protein sequence | MMDIIACLTQ QHDPRLIVVA ALICAVGCYA TFALGRQTFR ASGRERIGWA AAAVLTTSSA
IWATHFIAML AFAPGMAFGF ALAPTVASFA VAVMLVSLAA LAIVGSRTRH GAVAGGALIG
LAIAGMHYTG MAAYRVQGTI AWDGQRVAVS VLAGIALSVL ALRLSLAPQR LARALAPLAL
LLAVCGAHFI GMGALSLRYD PRIALPDGSL DAAVVTILTA NAAFLILGAA LAALRLSILN
HRRRVAERQR LRDLADIAVE GLLICDDDAI VGVNRSIERI LGRGREEVIG RALPDLLPGL
SAAAIPLTHE RDATLRDASG AEIPVRVIAQ TIAIETRPHL VVAVRDQRDR LRAEAAITHL
AHHDALTGLA NRLRFNGVLA ELLAERFAAR RHDPAPFALL ILDLDRFKAV NDTLGHGMGD
DLLRRVAQRL LRVVGAADVV ARLGGDEFAI LLAGAGDAAG AGDLAAIQAA AERAIEILSR
PFVIDGHILD IGASIGIALA PQDGDTPEQL LRSADLALYG AKEEGRGRFR MFEGTMNARM
QARRSLELDL RRALARQEFE LYFQPQVDAR TGRFDGAEAL IRWHHPERGL VSPGEFIPLA
EETGLIGPLG EWVLRTACAE ARRWATPLPV AVNLSPVQFR DPRLAATVRG ILAETGLPGS
RLEIEITEGT LMQDEHRTLA VLTELRGLGI RISMDDFGTG YSSLSYLRRF PFDKIKIDQS
FVRQTPQDRD SVAIVRAIAM LGRSLGIKTT AEGVETDQQS VFIAGEGCDQ LQGYLYSRPV
PAESIAELFR APRAPRA
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