Gene M446_4554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4554 
Symbol 
ID6130613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand+ 
Start bp5011810 
End bp5012445 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content74% 
IMG OID641644694 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001771329 
Protein GI170742674 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.67895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00125777 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTTCC TGCCCGACGC GCCGACCTTC GCCGCCTACC TGCTCGCCTG CCTCGTCCTC 
TTCGTGACGC CGGGGCCGGA CATGAGCCTG ATGCTCGCCC GCACGATCGG GGCCGGGCGG 
CGGGCCGGCC TCGCCACGGT GCTGGGCACC AGCACCGGCA CGCTCGGGCA CACCCTGGCG 
GCGGCTCTCG GCCTCTCGGC CCTGCTCGCG GCCTCGGCGA CGGCCTTCCT GGTGCTCAAG 
CTCGTGGGCG CCCTCTACCT AGCCTGGTTC GCCCTCGATG CCCTGCGCCG CGGCTCGGCC 
CTGACGGTGC GGGCCGAGCG GGTCGGGGGC GGCTTCCGGC GCGCCTTCTG GACCGGGGTC 
GGGGTGAACC TCACGAACCC GAAGGTCGTC CTGTTCTTCA TCACCTTCCT GCCGCAATTC 
GTGCGCGCCG ACGCGGTCAA CCTGGCCGGC CAGCTCGCCT TCCTGGGCGC CGCCTTCGTG 
GCCGTCACGC TGCCGCTCGG GATCCTCCTC GTCCTCGGGG CGGAACGGAT CACCGGCGCG 
CTCCAGGCCC GGCCGCGGAT GCTGCGCGCC ATCGACTGGC TCTTCGCCGG GCTGTTCGGG 
GCCTTCGCGG CGCGGATCCT GGCGACGGCG CGCTGA
 
Protein sequence
MTFLPDAPTF AAYLLACLVL FVTPGPDMSL MLARTIGAGR RAGLATVLGT STGTLGHTLA 
AALGLSALLA ASATAFLVLK LVGALYLAWF ALDALRRGSA LTVRAERVGG GFRRAFWTGV 
GVNLTNPKVV LFFITFLPQF VRADAVNLAG QLAFLGAAFV AVTLPLGILL VLGAERITGA 
LQARPRMLRA IDWLFAGLFG AFAARILATA R