Gene M446_4545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4545 
Symbol 
ID6135158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5001757 
End bp5002449 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID641644685 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001771320 
Protein GI170742665 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.399321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0489002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCGA ACTTCGATTT CAGCGTCATC GTCAGCGCGC TGCCCTACCT CTTCCTCACC 
GGGATGACCT TCACGCTGAC GCTGACCGCG CTGGCGGCGG TGAGCGGCAC CATCCTCGGC
ACGCTCATCG CCATGATGCG GCTCTCGGGC CTGCCGGTGC TGCCGCTGGT GGCCAAGGGC
TACGTCAACT TCATGCGCTC GCTGCCGCTG GTGCTGGTGA TCTTCTGGTT CTACTTCCTG
GTGCCGTATC TCGGGCAGTG GCTGATCGGG GCCGAGCGGC CGATCCAGGT CGGCGCCTTC
ACCTCCTCGC TCGTCACCTT CACGCTGTTC GAGGCGGCCT ACTTCTCCGA GATCATGCGG
GCGGGCATCC AGTCGATCCC CAAGGGTCAG GCCGCCGCCG CCTCGGCGCT CGGTCTGACC
TACTGGCAGA GCATGGGGTC GGTCATCCTG CCCCAGGCCT TCCGCAACAT GCTGCCGGTC
CTGCTGACCC AGACCATCGT GCTGTTCCAG GACACCTCGC TCGTCTACGT GCTGTCGATC
ACCGACTTCC TCGGCGCCGC CTCGAAGGTG GCGCAGCGCG ACGGGCGCCT CGTCGAGATG
TACCTCTTCG CCGCTTTGGT CTACTTCGCG ATCTGCTTCC TCGCCTCGAT CCTGGTGCGC
CGCCTGCAGC GCCGCATCGC CATCATCCGC TGA
 
Protein sequence
MLSNFDFSVI VSALPYLFLT GMTFTLTLTA LAAVSGTILG TLIAMMRLSG LPVLPLVAKG 
YVNFMRSLPL VLVIFWFYFL VPYLGQWLIG AERPIQVGAF TSSLVTFTLF EAAYFSEIMR
AGIQSIPKGQ AAAASALGLT YWQSMGSVIL PQAFRNMLPV LLTQTIVLFQ DTSLVYVLSI
TDFLGAASKV AQRDGRLVEM YLFAALVYFA ICFLASILVR RLQRRIAIIR