Gene M446_4519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4519 
Symbol 
ID6133814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4974153 
End bp4975028 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content77% 
IMG OID641644659 
Productlytic transglycosylase catalytic 
Protein accessionYP_001771294 
Protein GI170742639 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.821488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCG CCCTCCTCCT CTGCCTGATC CTCCCCTGGC TGCTCCTCCC GGCCCTCGCC 
CCGCGCCCGG CCGCGGCGCA GCCGGCCGGG GCCGCCACCG AATCCGTCGA GCAGGCGCTG
TGCCGCCTGA TCGAGGGCGC CGCCCAGGCG CAATCCCTGC CGGTCGCCTT CCTGACGCGG
CTGATCTGGC GGGAGAGCAG CTTCCGGCCG GGCGTGGTCA GCCCGGCCGG CGCGCAGGGC
GTGGCGCAGT TCATGCCCGG CACCGCCGCC GAGCGCGGCC TCGCCGACCC CTTCGACCCC
GAGCAGGCGA TCCCGCACGC GGCGCGCCTG CTCTCGGACC TGCGCCGCCG CTTCGGCAAT
CTCGGCCTGG CGGCGGCGGC CTACAATGGC GGGCCCGGCC GGGTCTCGTC CTGGCTCGCC
GGCAGCGGGG GCCTGCCGGG CGAGACCCGC TCCTACGTCT CGGCCATCAC CGGCCGCACC
GCCGAGGATT GGGCGGCGGA GGCCAAAGCG GACGCCAAGG GAGACCTCAC CGAGCCGCCC
GGCACGCGCT GCCTCCAGGT GACGGCCGCC CTGCGGATCC GCGGCCGCAC CGAGACCTAC
TTCGCCGACA GCACGCCGTC GCTCGCGCCC TGGGGCATCC AGCTCGCCGG CAACTTCTCC
AAGGCCGCCG CCCTCGCGGC CTTCGGCCGT GCCCGCGCCC TCTACGCCTC GGTCCTGGGC
GAGGTCCGCC CGATGGTGAT CGGGACGCGC TTCCGCAGCC GCGGCACGCG CGCCTTCTAC
CGGATCCGGG TGCCGGCGGA GACCCGCCAG GCGGCGGAGG GGCTGTGCAA CCGGATCCGC
GGGATCGGCG GCGCCTGCCT GGTGCTCAAG ACCTGA
 
Protein sequence
MTRALLLCLI LPWLLLPALA PRPAAAQPAG AATESVEQAL CRLIEGAAQA QSLPVAFLTR 
LIWRESSFRP GVVSPAGAQG VAQFMPGTAA ERGLADPFDP EQAIPHAARL LSDLRRRFGN
LGLAAAAYNG GPGRVSSWLA GSGGLPGETR SYVSAITGRT AEDWAAEAKA DAKGDLTEPP
GTRCLQVTAA LRIRGRTETY FADSTPSLAP WGIQLAGNFS KAAALAAFGR ARALYASVLG
EVRPMVIGTR FRSRGTRAFY RIRVPAETRQ AAEGLCNRIR GIGGACLVLK T