Gene M446_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4506 
Symbol 
ID6134303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4962890 
End bp4963846 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content77% 
IMG OID641644646 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001771281 
Protein GI170742626 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.23371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGAGA GCCCGGAGAG CGTGCGGCGC GTCGCCGTGA TCGGCTGCGG CACCGTGGGG 
GCGAGCTGGG CGGCCCTGTT CCTCGCCCAC GGCCTCGACG TGGCGGCGAC GGACCCGGCG
CCGGGCGCCG AGGCGCGGCT CCTCGCCTTC GTGGCGGGCG CGCGGGCGCA GCTCGCCGGG
TTCGGCCTGC GCGGCGCGGG CCGCCTGGAC TTCCGCGCCT CGGTGGCGGA GGCCCTCGAC
GGCGCGGATT TCGTGCAGGA GAACGCGCCC GAGAGCGAGG CGCTGAAGCG CCCGCTCCTC
GCCGAGATCG ACCGCCTGCT GCCGGCGCGC GTGCTGGTGG CGAGCAGCAC CTCGGCGCTC
CTGCGCAGTG CCATCGTGGC CGATTGCGCA CGGCCCGAGC GCGTCCTCGT CGCGCATCCG
TTCAACCCGC CCCACCTCGT GCCGCTGGTC GAGATCGTGG CCGGGAGCGA GGCGGCGGCC
GCCCGCGCCG CCGGCTTCTA CCGCGGCCTC GGGCGCCGGC CCGTGATCCT GCGCCGCGAG
ATGCCGGGCC ACATCGCCAA CCGCCTCACC GCGGCGCTCT ACCGGGAGGC GGTCAACCTC
GTCGCCGAGG GGGTGGCGAG CGTGGCGGAT ATCGACGCCG CGCTCTGCCA CGGGCCGGGC
CTGCGCTGGG CCGCGATGGG GCCGCACATG ACCTACCACC TGGGCGGCGG TCCGGGCGGC
ATCGCCCATT ACCTCGCCCA TCTCGGCCCG AGCCAGGAGC GGCGCTGGGC CTCGCTCGGC
CGGCCTGCGC TGACGCCGGA GGTGCGGGCC GCGATCGTGG CGGGCGTCGC CGAGGAGGCG
GCCGGCCTCT CGGTGGCGGA GCTGGAGGCC CGGCGGGACC GGGCGCTGAT CGAGATCCTG
AAGGCGCGGG TGACGGTGGT CCCGGAGCCC GCCGACGCTC CGGAGGACCA CGCGTGA
 
Protein sequence
MSESPESVRR VAVIGCGTVG ASWAALFLAH GLDVAATDPA PGAEARLLAF VAGARAQLAG 
FGLRGAGRLD FRASVAEALD GADFVQENAP ESEALKRPLL AEIDRLLPAR VLVASSTSAL
LRSAIVADCA RPERVLVAHP FNPPHLVPLV EIVAGSEAAA ARAAGFYRGL GRRPVILRRE
MPGHIANRLT AALYREAVNL VAEGVASVAD IDAALCHGPG LRWAAMGPHM TYHLGGGPGG
IAHYLAHLGP SQERRWASLG RPALTPEVRA AIVAGVAEEA AGLSVAELEA RRDRALIEIL
KARVTVVPEP ADAPEDHA