Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4500 |
Symbol | |
ID | 6134297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4955711 |
End bp | 4956460 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641644640 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001771275 |
Protein GI | 170742620 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.523982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0336544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT CTTCCTCCGC CCGCCGGGCC AAGCCGGGGC CGGCGACGCC TCCGACCCTT CCCGTCGAGG TGCAGGAGCA TCTCGGCCGC CAGCTGCGCG ACGCTTACGC GGCGCTCGGC GACATCGAGG CGCCGGCCGC CTTCTCGGAC CTCCTCGGGC GCCTCGACAA GGCCCTCGCG GCGCTCGGCG CGCCGCGCAA GGACCGCTTC CGCGACGAGC TCCTGGCCGC CGCCCCCTCC CTGCGGCGCT TCGCCCTCAC CCTGACGGCG AACCCGGCCC GGGCCGACGA CCTCGTGCAG GACACCCTGC TCAAGGGCTG GCAGAACCGC GACCGATTCG AGGACGGCAC CAATCTCAGC GCGTGGCTGT TCACGATCAT GCGCAACGCC TTCTACTCGG AGCACCGCAA GCGCTCCCGC GAGGTGGAGG ACGGCGAGGG CGTCTATTCC GCGCGCCTGA CCACCGCCCC CAACCAGGGG GACCGGCTCG ACGTGCAGGA TCTGCAGGAG GCGCTCAACA AGCTGGTCGC CGAGCAGCGG GAGGCCCTGC TCCTCGTGGC GGTCGGGGAC CTCTCCTACG AGGACGCCGC CGCGCTGATG CAGTGCAAGG TCGGCACGGT GAAGAGCCGC GTCTGCCGCG CCCGCGACCG GCTGGCCGAG CTCCTCGGCT ATTCGGGCGG GGAACTCGGC GCCGACCGGC TGACCCGCTC GGTCCTCAGC AACGCGAGCC TGATGGCGAT CGAGGGCTGA
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Protein sequence | MTDSSSARRA KPGPATPPTL PVEVQEHLGR QLRDAYAALG DIEAPAAFSD LLGRLDKALA ALGAPRKDRF RDELLAAAPS LRRFALTLTA NPARADDLVQ DTLLKGWQNR DRFEDGTNLS AWLFTIMRNA FYSEHRKRSR EVEDGEGVYS ARLTTAPNQG DRLDVQDLQE ALNKLVAEQR EALLLVAVGD LSYEDAAALM QCKVGTVKSR VCRARDRLAE LLGYSGGELG ADRLTRSVLS NASLMAIEG
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