Gene M446_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4500 
Symbol 
ID6134297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4955711 
End bp4956460 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID641644640 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001771275 
Protein GI170742620 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.523982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0336544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT CTTCCTCCGC CCGCCGGGCC AAGCCGGGGC CGGCGACGCC TCCGACCCTT 
CCCGTCGAGG TGCAGGAGCA TCTCGGCCGC CAGCTGCGCG ACGCTTACGC GGCGCTCGGC
GACATCGAGG CGCCGGCCGC CTTCTCGGAC CTCCTCGGGC GCCTCGACAA GGCCCTCGCG
GCGCTCGGCG CGCCGCGCAA GGACCGCTTC CGCGACGAGC TCCTGGCCGC CGCCCCCTCC
CTGCGGCGCT TCGCCCTCAC CCTGACGGCG AACCCGGCCC GGGCCGACGA CCTCGTGCAG
GACACCCTGC TCAAGGGCTG GCAGAACCGC GACCGATTCG AGGACGGCAC CAATCTCAGC
GCGTGGCTGT TCACGATCAT GCGCAACGCC TTCTACTCGG AGCACCGCAA GCGCTCCCGC
GAGGTGGAGG ACGGCGAGGG CGTCTATTCC GCGCGCCTGA CCACCGCCCC CAACCAGGGG
GACCGGCTCG ACGTGCAGGA TCTGCAGGAG GCGCTCAACA AGCTGGTCGC CGAGCAGCGG
GAGGCCCTGC TCCTCGTGGC GGTCGGGGAC CTCTCCTACG AGGACGCCGC CGCGCTGATG
CAGTGCAAGG TCGGCACGGT GAAGAGCCGC GTCTGCCGCG CCCGCGACCG GCTGGCCGAG
CTCCTCGGCT ATTCGGGCGG GGAACTCGGC GCCGACCGGC TGACCCGCTC GGTCCTCAGC
AACGCGAGCC TGATGGCGAT CGAGGGCTGA
 
Protein sequence
MTDSSSARRA KPGPATPPTL PVEVQEHLGR QLRDAYAALG DIEAPAAFSD LLGRLDKALA 
ALGAPRKDRF RDELLAAAPS LRRFALTLTA NPARADDLVQ DTLLKGWQNR DRFEDGTNLS
AWLFTIMRNA FYSEHRKRSR EVEDGEGVYS ARLTTAPNQG DRLDVQDLQE ALNKLVAEQR
EALLLVAVGD LSYEDAAALM QCKVGTVKSR VCRARDRLAE LLGYSGGELG ADRLTRSVLS
NASLMAIEG