Gene M446_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4493 
Symbol 
ID6133447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4945864 
End bp4947078 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content76% 
IMG OID641644633 
Productdiguanylate cyclase 
Protein accessionYP_001771268 
Protein GI170742613 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.605021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0319626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG GTCAGAAAGG TTCGCCCCGA TCTCTCGACG AGACCGACCG GCGCGAACTG 
GTCGATCTCC TCTACGCCTC GCTGCCGCAG TTCGTCGCCT CGACCGGGAT CGCCACCCTC
GGCGGCGCGA CGATCGCGGC GGTCGGGCGC GACCTCGTCG ACGCCGCGAT CGCCGCGGCG
CTCGGGGTGA TCGGGCTCGC CCGCATCGGG AGCCTGCTGC ACTATCCGCG CGGGCGGTCC
CTGACCGCCG CCGAGGTCCG GCGCTGGGAG CGGATCTACG GCGCCGGGGC CGCCCTGTTC
GCGGCGGCCC TGGGGGCGCT CGCGTGGCGG GCGCTCGACC GGGACGACGC GCCCGGCGCG
TGGCTCAGCT TGGGCCTCGC GGTCGGCTAC TGCGTCGGCC TCATGTCCCG GGCGGCCGTG
TGCCCCTGGA TCGTGATGCT GGCGACGGCC GTGCTCTTCG CACCGATCCT GGTCGGCGGC
CTGATGCGGC CGGAGCCCGC CTATCAGGTC GGCGCCGCCA TTCTGGTGCC GTTCTGGCTG
ACGGTGCGCG AATCCGCGCG CCACCTCAGC GGCGCCTTCA TCGAGCGCCT GGAGGCGAAG
CGCGCCCTGG CGCACCAGGC CGAGCACGAC GCGCTCACCG GGCTGCTCAA CCGGGCCGGC
TTCCTGGCCC GGCTCGGCGC CGCGCTGGAG CAGGCCGGGA GCCGGCCCTT CGCCCTGATC
GCCATCGACC TCGACGGTTT CAAGCGCGTC AACGACCGCC TCGGCCATCC GGTGGGGGAC
GCCGTGCTGG TCGAGGTCGG GATGCGCCTG CGCCGCTGCC TCGCCCCGGA CGACGTCGCC
GGGCGCCTCG GCGGGGACGA GTTCATGATC CTGACGCGGG CCGATGGCGG GGTGCCGGCC
GCGGCCGACC GGGCCGAGCG GGTGATCGCC GCCCTGAGTG ATCCCTACCC GGTCGCCGAG
CCGCAGCGGA TCGGGGCGAG CGCCGGCCTC GCGTCGAGCG AGGATTGGCG CGAGGCCCTC
GACGCGGCCG CGCTGCTGGA GCGGGTCGAC GAGGCGCTCT ACGCCGCCAA GCGCGGCGGT
CGCGGCCGCT GGTGCGCGGC CCGGCCCGGC GGCGCCGTGG ATGGGCCGGT GCCGTGGATG
GGCCCGCGGC GGGGTGGCCC GAGAGCCTGC GCCGGGGCCC GGTCGAGCAG GCCTGATCCC
AACGCAGGCC TCTGA
 
Protein sequence
MTQGQKGSPR SLDETDRREL VDLLYASLPQ FVASTGIATL GGATIAAVGR DLVDAAIAAA 
LGVIGLARIG SLLHYPRGRS LTAAEVRRWE RIYGAGAALF AAALGALAWR ALDRDDAPGA
WLSLGLAVGY CVGLMSRAAV CPWIVMLATA VLFAPILVGG LMRPEPAYQV GAAILVPFWL
TVRESARHLS GAFIERLEAK RALAHQAEHD ALTGLLNRAG FLARLGAALE QAGSRPFALI
AIDLDGFKRV NDRLGHPVGD AVLVEVGMRL RRCLAPDDVA GRLGGDEFMI LTRADGGVPA
AADRAERVIA ALSDPYPVAE PQRIGASAGL ASSEDWREAL DAAALLERVD EALYAAKRGG
RGRWCAARPG GAVDGPVPWM GPRRGGPRAC AGARSSRPDP NAGL