Gene M446_4474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4474 
Symbol 
ID6135540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4925871 
End bp4927067 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content76% 
IMG OID641644614 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001771249 
Protein GI170742594 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00194673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCTGT CGCAGGGCGA ATTCTCTGAT CTGGTCGGCC GCATCTACGA TTGCGGGCGC 
GATCCGGAGC TCTGGCCGGA CACGCTCGCG CGGCTCGTCG AGGCGCTCGG CGCCGTGGCA
GGCTGGATCG GCGTGCACGA TGCCGAGACC GGAACCGGGC GGCTCGCCGT CGATGTCGGG
CTGTCGCCGG ATCACCGCTC CCTCTACGCG GAGCGCTTCG CCGGCCTCTC CCCGCTCGCC
CTGGGCACGT GGTTCACGCA GGTCGGCGAC GTGGTCGGCC TCTCGGAGCT CATCGACCGG
GACGCGTTCC GCGGCACGCA TTTCTACCGG GAATGGTGCC GGCCGCAGCA GGTCGAGGAC
CTGATCGCCG GCGTGCTGAC CAAGGCCTCG GGGGGATGCG GCAGCCTGTC GGCCTCCTTC
GACCGGCCGG TCTCGCTGGA GGCGCGGGAG CTGATGACGC TCCTGCTGCC GCACGTGCGC
CGGGCCGTCG AGACGGGCCA GCTCCTCGCC GAGCAGTGCG GCGAGGCGGA GGGCCTGTCC
TCGGCCATGG ACGCGCTCAG CCTGGGCGTG TTCCTGCTCG ACGCGGCGGG CCGGGTGCTG
CGCGCGAACG CCGCCGCCGA GGCGATCCTG CGCCAGGGCG ACGCCCTGCG GCGCCTGCCG
GCGGGCACGC TGGCCACGGC GGAGCCCTGG TCGCAGGGGG CGCTCGAGGG GGCCCTCGCG
GCCTGCCGCG ACGACGACCG CACCCGCTGC CGCGCGGCGC TGCCGTTCCC CTCGCGCCGC
GGGTCCGGTC CGCGGGGCGG CCTCGTCGGG CAGATCGTCC CGGTCCGCGG CGCGGCATGC
GGGTCCCGGG CGGGGCGGGG GGGCGAGGGG GAACGCCAGC CGGTGGCGGC CCTGTTCGTG
CAGGATCCCG ACGCGGCCGT GTCGATTCCG AGCGAGGCGC TGGAGCGCCT CTACGGGCTG
ACCCAGGGCG AATTGCGGGT GCTGCGGGGC CTGATGCAGG ACATGACCCT GAGCGAGATC
GCCGAGGCCT ACGGCATCGG CGTGGCGACG GTGCGCACGC ACCTCGCGCG CCTGTTCGAC
AAGACCGGGA CCCGCCGGCA GGCCGAGCTG CTGCGGGCGG TGATGGCCGC CGCCCCGGCT
TTGCGCCCCG CCGAGGCGCG CCCCGGCCCG GCCGGGCGCC TCGCCGCGAC CGCGTGA
 
Protein sequence
MPLSQGEFSD LVGRIYDCGR DPELWPDTLA RLVEALGAVA GWIGVHDAET GTGRLAVDVG 
LSPDHRSLYA ERFAGLSPLA LGTWFTQVGD VVGLSELIDR DAFRGTHFYR EWCRPQQVED
LIAGVLTKAS GGCGSLSASF DRPVSLEARE LMTLLLPHVR RAVETGQLLA EQCGEAEGLS
SAMDALSLGV FLLDAAGRVL RANAAAEAIL RQGDALRRLP AGTLATAEPW SQGALEGALA
ACRDDDRTRC RAALPFPSRR GSGPRGGLVG QIVPVRGAAC GSRAGRGGEG ERQPVAALFV
QDPDAAVSIP SEALERLYGL TQGELRVLRG LMQDMTLSEI AEAYGIGVAT VRTHLARLFD
KTGTRRQAEL LRAVMAAAPA LRPAEARPGP AGRLAATA