| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4460 |
|---|
| Symbol | |
|---|
| ID | 6132326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4914208 |
|---|
| End bp | 4914747 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641644600 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_001771235 |
|---|
| Protein GI | 170742580 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.947676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00641556 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT GGCTCGTCGC CCTGGCGTTC ACCGTCGCGG CATCCTTCGG CGCCGCCGCG
GCGCCGGACG CCAACACGGT CTACCTCGAC ACCAAGGACG GCCGCATCAC CATCCAGCTG
CGGCCCGAAC TCGCGCCCAA GCACGCGCAG CAGATCAAGA CGCTGGTCCG GCAGGGCTTC
TACAACGGCG TGCCGTTCCA CCGGGTGATC GACGGGTTCA TGGCCCAGAC CGGCGACCCG
ACCGGCACCG GCACCGGCAA GTCGAAGCTG CCCGACCTGC CGGCCGAATT CACGCCGACG
CCGTTCAAGC GCGGCACGGT CGGCATGGCC CGCTCGCAGG ACCCGAACTC CGCCAACTCG
CAGTTCTTCA TCTGCTTCGA CGAGGCGCCC TTCCTCAACA ACCAGTACAC GGTGGTGGGC
ACCGTCACCG CCGGCATGGA CGTGGTCGAC AAGATCAAGA AGGGCGCGAA GTCCGCCAAC
GGCCAAGTGC AGAACCCCGA CAAGATCGTC CGGATGACGC TGGCCCAGGA TGGTCAGTAG
|
|---|
| Protein sequence | MIRWLVALAF TVAASFGAAA APDANTVYLD TKDGRITIQL RPELAPKHAQ QIKTLVRQGF
YNGVPFHRVI DGFMAQTGDP TGTGTGKSKL PDLPAEFTPT PFKRGTVGMA RSQDPNSANS
QFFICFDEAP FLNNQYTVVG TVTAGMDVVD KIKKGAKSAN GQVQNPDKIV RMTLAQDGQ
|
|---|
| |