| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4416 |
|---|
| Symbol | |
|---|
| ID | 6129886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4864750 |
|---|
| End bp | 4867869 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641644557 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001771192 |
|---|
| Protein GI | 170742537 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.248497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.815285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCCCT CCCGCCTCTT CATCCTGCGC CCGGTCGCCA CCACGCTCCT GATGCTGGCG
ATCCTGCTCA CCGGGCTCCT GTCCTACCTG AACCTGCCGC TCTCGGCCCT GCCCTCCGTC
GATTACCCGA CGATCCAGGT CCAGACCTTC TACCCGGGCG CCAGCCCCGA GGTGATGACC
TCGGCCGTGA CCGCCCCGCT CGAGCGGCAG TTCGGGCAGC TTGCCAACCT CAACCAGATG
ACCTCGCAAT CCTCCGCGGG CGCCTCGGTC ATCACGCTCC AGTTCAACCT CGACCTCTCT
CTCGACATCG CCACCCAGGA GGTGCAGGCC GCGATCAACG CGGCCGGCAA CCTGCTGCCG
AGCGACCTGC CGGCCCCGCC CGTCTACGCC AAGGTGAACC CGGCCGACGC GCCGATCCTC
ACCCTCGCGC TCACCTCCAA GACCCTCGCG CTCACCCAGG TTCGCGACCT CGCCGAGACG
CGCCTCGCCC AGAAGATCTC GCAGGTGGCC GGGGTCGGGC TCGTCACCAT GGCGGGCGGG
CAGCGCCCCG CCGTGCGGGT GCGCTTCAAT TCCCGGGCGC TCGCCGCCTA CGGCCTCAAC
ATCGACGACC TGCGCACCAC GATCGCCAAC CTGAACGTCA ACACGCCCAA GGGCACGATC
GACGGGCCGG CCCAGTCCTT CGCCATCAAC GCCAACGACC AGATCCGCGA CCCCGCCGTC
TACCGGGACG CGATCATCGC CTACCGCAAC GGCGCCCCCG TGACGCTCTC GGCCGTCGCC
GACGTGGTCG AGGGGCCGGA GAACACCAAG CTCGGCGCCT GGATGGACAC GACCCCCGCC
ATCATCCTCA ACATCCAGCG CCAGCCCGGG GCCAACGTCA TCGCGGTGGT GGACCGCATC
AAGGCGCTGC TGCCGCAGCT CCAGGCGACC CTGCCGGCCG CGATCCAGGT CACCCCGCTC
ACCGACCGCA CGGTGACGAT CCGCGCCTCC GTGCACGACG TGCAGATGGA GCTGCTGCTC
GCCATCGCGC TCGTCGTGCT GGTGATCTTC CTGTTCCTGC GCTCGCTGCC CGCGACCCTG
ATCCCGAGCC TGTCGGTCCC GCTCTCCCTG GTCGGGGCGC TCGCGGTCAT GGACCTGTGG
GGCTTCTCCC TCGACAACCT CTCGCTGATG GCCCTCACCA TCGCCACCGG CTTCGTGGTC
GACGACGCCA TCGTGGTGAT CGAGAACATC GCCCGCCACG TGGAGGAGGG CGCCTCGCCC
TTCGAGGCGG CCCTCAAGGG CTCGGAGGAG ATCGGGTTCA CCATCATCTC GCTGACCGTG
TCGCTGCTCG CGGTGCTGAT CCCGCTCCTG TTCATGGGCG AGGTGGTGGG GCGGCTCTTC
CACGAATTCG CGATCACGCT CGCGGCGACC ATCGTCATCT CGGGCATCGT CTCGCTCACC
CTGGTGCCGA TGCTCTGCGC CCGGCTGCTG CGCCACGCGC CGCCGCGGGC GCGGCGCGAG
GGCCGCCTCG CGCGGGCCGG GCGCTGGACC ATGGAGGCGG GGATCGGCCT CTACGGGCGC
ACCCTGCGCG GCGTGCTGAA CCACCAGGGG CTCACCCTCG TGGTGGCGCT CGGCACCCTC
ATCCTCACTT TCCACCTCTA CGTCGTCATC CCGAAGGGCT TCTTCCCGGT CCAGGATACG
GGCCTGATCC AGGGCATCTC GCAGGCCGAC CAGACCGTGT CCTTCGCGGC CATGGCCGAG
CGCCAGCAGC GCCTCGCCGA GGCGATCCTG AAGGATCCGG ACGTGGTCAG CGTCTCGTCC
TTCATCGGGG TCGACGGCCA GAACGTGACC CTCAATTCGG GCCGCTTCCT CATCAACCTG
CGCCCCCGCG AGGCGCGGGC GGAGCACGCG GGCGCCATCA TCCGGCGGAT CGCGGCGCGC
ACCGCCGAGG TTCCGGGCAC CACCCTCTAC ATGCAGCCGG TGCAGGACCT CACCATCGAC
ACGGCGGTGA GCCCCACCCA GTACCAGTTC ATCCTGGAGA ATCCGGACCT CAACGCCTTC
GAGGCCTGGG TGCCGCGCTT CGTCGAGCGG CTGCGGCGCA TCCCGGACCT CGCCGACGTG
GCGAGCGACC GGCAGGCGAA CGGGCTCGCC GCCCACATCA CCATCGACCG CGCCACCGCG
GGCCGCTACG GCATCACGCC GGCCTCGGTC GACAACGCCC TCTACGACGC CTTCGGGCAG
CGCATCATCT CGACCATCTT CACCCAGTCG AACCAGTACC GGGTGATCCT CGAGGCCGAT
CCCGACCTGC ACCGCACGCT CGCCTCCCTC AACCGGATCT ACCTGCCCTC CTCGACGGCG
CAGAACGGTC AGGTGCCGCT CTCGGCGATC GCGACCGTGA CCGAGAAGCG GGCCCCGCTG
CTGATCAGCC ATCTCGGCCA GTTCCCGGCG ACCACGATCT CGTTCAACCT CGCCCCCGGC
GCCTCGCTCG GCCCGGCCGT GGCGGCGATC GAGGCGGCGC GGGCCGAGAT CGGCCTGCCG
GACAGCTTCC AGCTGGTCTT CCAGGGCTCG GCGCTGGCCT TCCAGTCCTC GCTCAAGAAC
ACGCTGTTCC TGGTGCTCGC CGCCATCGTC ACGGTCTACA TCGTGCTCGG CGTGCTCTAC
GAGAGCTTCA TCCACCCGAT CACCATCCTG TCGACCCTGC CCTCGGCCGG GATCGGGGCG
CTCGCCGGGC TGATGCTGTT CGGGCTCGAC CTCGACATCA TCGGCATCAT CGGCATCGTG
CTGTTGATCG GCATCGTGAA GAAGAACGCC ATCATGATGA TCGACTTCGC GCTCCAGGCG
GAGCGCGAGG AGGGGAAGAG CCCGCGCGAC GCGATCTACG AGGCCTGCCT GCTGCGCTTC
CGGCCGATCA TGATGACCAC CTTCGCGGCC CTGTTCGCGG CGGTGCCGAT GATCTTCGGC
AGCGGCACGG GGGCGGAGCT GCGCCAGCCC CTGGGCATCT CGATCGCGGG CGGGCTGATC
GTGAGCCAGG TGCTCACGCT CTACACCACG CCGGTGATCT ACCTCGCCTT CGACCGCCTC
GCCCGCCGCC TGGGCGGCCG GCGCCGGGGC GGGCTCGCCC CGGGCGGGGC GGTGCCGTGA
|
|---|
| Protein sequence | MNPSRLFILR PVATTLLMLA ILLTGLLSYL NLPLSALPSV DYPTIQVQTF YPGASPEVMT
SAVTAPLERQ FGQLANLNQM TSQSSAGASV ITLQFNLDLS LDIATQEVQA AINAAGNLLP
SDLPAPPVYA KVNPADAPIL TLALTSKTLA LTQVRDLAET RLAQKISQVA GVGLVTMAGG
QRPAVRVRFN SRALAAYGLN IDDLRTTIAN LNVNTPKGTI DGPAQSFAIN ANDQIRDPAV
YRDAIIAYRN GAPVTLSAVA DVVEGPENTK LGAWMDTTPA IILNIQRQPG ANVIAVVDRI
KALLPQLQAT LPAAIQVTPL TDRTVTIRAS VHDVQMELLL AIALVVLVIF LFLRSLPATL
IPSLSVPLSL VGALAVMDLW GFSLDNLSLM ALTIATGFVV DDAIVVIENI ARHVEEGASP
FEAALKGSEE IGFTIISLTV SLLAVLIPLL FMGEVVGRLF HEFAITLAAT IVISGIVSLT
LVPMLCARLL RHAPPRARRE GRLARAGRWT MEAGIGLYGR TLRGVLNHQG LTLVVALGTL
ILTFHLYVVI PKGFFPVQDT GLIQGISQAD QTVSFAAMAE RQQRLAEAIL KDPDVVSVSS
FIGVDGQNVT LNSGRFLINL RPREARAEHA GAIIRRIAAR TAEVPGTTLY MQPVQDLTID
TAVSPTQYQF ILENPDLNAF EAWVPRFVER LRRIPDLADV ASDRQANGLA AHITIDRATA
GRYGITPASV DNALYDAFGQ RIISTIFTQS NQYRVILEAD PDLHRTLASL NRIYLPSSTA
QNGQVPLSAI ATVTEKRAPL LISHLGQFPA TTISFNLAPG ASLGPAVAAI EAARAEIGLP
DSFQLVFQGS ALAFQSSLKN TLFLVLAAIV TVYIVLGVLY ESFIHPITIL STLPSAGIGA
LAGLMLFGLD LDIIGIIGIV LLIGIVKKNA IMMIDFALQA EREEGKSPRD AIYEACLLRF
RPIMMTTFAA LFAAVPMIFG SGTGAELRQP LGISIAGGLI VSQVLTLYTT PVIYLAFDRL
ARRLGGRRRG GLAPGGAVP
|
|---|
| |