Gene M446_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4406 
Symbol 
ID6130027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4854894 
End bp4855298 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID641644547 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_001771182 
Protein GI170742527 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.865386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.62826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC GGTTGAATCA CGTCGCCATC GCGGTGAAGG ACCTCGACGC CGCCGCGAAG 
GTCTACCGCG ACACGCTCGG CGCGGCGCTG TCGCCGCCCC TCGCGCAGCC GGAGCACGGC
GTCACGGTCA TCTTCGTCGA GTTGCCCAAC AGCAAGATCG AGCTGCTCGA ACCGCTCGGG
GCCGACTCGC CGATCGCCGC CTTCCTGGAG CGCAACCCGG GCGGCGGCAT CCACCACGTC
TGCTACGAGG TCGACGATAT CCTGGCGGCC CGGGACCGGC TGAAGGGCGA GGGGGCCCGC
ATCCTCGGCA GCGGCGAGCC GCGCATCGGC GCGCACGGCA AGCCGGTGCT GTTCCTGCAC
CCGAAGGACT TCCTCGGGAC GCTGGTCGAG CTGGAGCAGG CCTGA
 
Protein sequence
MIGRLNHVAI AVKDLDAAAK VYRDTLGAAL SPPLAQPEHG VTVIFVELPN SKIELLEPLG 
ADSPIAAFLE RNPGGGIHHV CYEVDDILAA RDRLKGEGAR ILGSGEPRIG AHGKPVLFLH
PKDFLGTLVE LEQA