Gene M446_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4379 
Symbol 
ID6133768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4825537 
End bp4826238 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content78% 
IMG OID641644518 
Productputative transmembrane signal peptide protein 
Protein accessionYP_001771156 
Protein GI170742501 
COG category[R] General function prediction only 
COG ID[COG3577] Predicted aspartyl protease 
TIGRFAM ID[TIGR02281] clan AA aspartic protease, TIGR02281 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0759389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCG CCGCCGGTGT CGCCCTGCTC CTCCTCGCCG CGGGGGCCGG CGTCGCGGCC 
CTGGCGCGGG GCGACATCGG CGGGTGGAGC CCGCCGGAGG TCGCGACCGG GCTCGGCGCC
GCGGCGGCGC TCCTGGTGAT CCTGAGCGGC ATCGTCCGGC AGTTCCGGAT CGGGATCGGG
GAGGGTCTGG GCGCCCTCCT GGTCTGGCTC TGCCTGGGCG CCGGCGCGGC CGGGCTCTAC
GCGTGGCGCG ACCAGGCCCG GGACTTCGCC TTCCGGGTCT TCGGCGAGCT GGCGGCGGGC
GAGCCGGTGG TGACGCCGGG CGGGGAGGTG GTGATCGCGC GGCGCGCCGA TGGCGGCTTC
ACCCTGAGGG CGCGGGCGAA TGGCCGCGAG CAGGTCTTCG CCTTCGACAC CGGGGCGAGC
GCGGTGGTCC TCACCGCCGA GAGCGCGGCC GCGCTCGGCC TGCATCCCCG GCCGGAGGCG
TTCGTCGTGA TGGTCCAGAC CGCGAACGGC CGCGCCGCCG CCGCCCCGGT CATCCTCGAC
AGCCTCGCGG TCGGGCCGAT CCGCGAGGAG CGGGTGCCCG CCCTGGTGAC GCGGCCCGGG
ACCCTCGGCC TCAACCTCCT CGGCATGACC TTCCTGGAGC GCCTCGCCTC CTACGAGGTG
CGCGGCAGCC GGCTGATCCT GCGCGGCGCC CGGCCCGGCT GA
 
Protein sequence
MPGAAGVALL LLAAGAGVAA LARGDIGGWS PPEVATGLGA AAALLVILSG IVRQFRIGIG 
EGLGALLVWL CLGAGAAGLY AWRDQARDFA FRVFGELAAG EPVVTPGGEV VIARRADGGF
TLRARANGRE QVFAFDTGAS AVVLTAESAA ALGLHPRPEA FVVMVQTANG RAAAAPVILD
SLAVGPIREE RVPALVTRPG TLGLNLLGMT FLERLASYEV RGSRLILRGA RPG