| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4366 |
|---|
| Symbol | metH |
|---|
| ID | 6133069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4810762 |
|---|
| End bp | 4814505 |
|---|
| Gene Length | 3744 bp |
|---|
| Protein Length | 1247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641644505 |
|---|
| Product | B12-dependent methionine synthase |
|---|
| Protein accession | YP_001771143 |
|---|
| Protein GI | 170742488 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.778137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TCCGCCCCGC CGACGGCGCC AACGTCCTCG CCACCCTGCG CAAGCGCGCC
GCCGAGAGGA TCCTCGTCCT CGACGGCGCC ATGGGGACCA TGATCCAGCG CCTCAAGCTC
GGCGAGGCGG ATTTCCGCGG CAAGCGCTTC CTCGACCACG CGCACGATCA GAGGGGCAAC
AACGACCTTC TGATCCTGAC CCAGCCCGAG GCGATCCGGC AGATCCACCT CGACTACTTC
CTGGCCGGCG CGGACGTGGT CGAGACCAAC ACCTTCTCGG GCACCGCGAT CGCCCAGGCC
GATTACGGCA TGGAGGCGAT CGTCCGCGAA CTCAACCGCG AGGGCGCGCG GCTCGCCCGC
GAGGCGGCGG TCGAGGCCGA GCGCCGCGAC GGGCGGCGCC GCTTCGTGGC CGGGGCGATC
GGTCCGACGA ACCGCACGCT CTCGATCTCG CCCGACGTGA ACAATCCGGG CTACCGCTCC
GTCACGTTCG ACCAGGTCCG CGACGCCTAC GCCGAGCAGG TGCGCGGGCT GATCGAGGGC
GGCTCGGACC TCGTCCTGAT CGAGACGATC TTCGACACGC TGAACGCCAA GGCGGCGATC
GCGGCGACCT GGCAGGTCTT CGGCGAGATG GGCGTGCGCC TGCCGATCAT GATCTCGGGC
ACGATCACCG ACCTGTCGGG CCGCACGCTC TCGGGCCAGA CCCCGAGCGC CTTCTGGCAC
TCGCTGCGCC ACGCCGAGCC GCTGACCTTC GGGCTCAACT GCGCGCTCGG CGCCCGCGAG
ATGCGCGCCC ACATCAGCGA ACTCTCCCGG GTCTGCGACA CGCTGGTCTG CGCCTACCCG
AATGCCGGCC TGCCGAACGA GTTCGGCCTC TACGACGAGA GCCCGGAGGC GATGGGCGCC
CTCGTCGGCG AGTTCGCGGG AAGCGGCCTC GTCAACATGG TGGGCGGCTG CTGCGGCACG
ACGCCGGACC ACATCCGCGC CATCGCCGAG GCGGTGGCCG GCAAGGCGCC CCGGCGCGTG
CCGGAGGTGC CGCGGCTGAT GCGGCTCTCG GGCCTCGAAC CCTTCACGCT GACGAAGGAG
ATCCCCTTCG TGAACGTCGG CGAGCGCACG AACGTCACCG GCTCGGCCAA GTTCCGCAAG
CTCGTCACCA GCGGCGACTA CGCGGCCGCC CTCGACGTCG CCCGCGACCA GGTCGCGGCC
GGCGCTCAGG TCATCGACGT CAACATGGAC GAGGGCCTGC TCGATTCGCG CGCCGCGATG
GTCGAGTTCC TGAACCTGGT CGCGGCCGAG CCCGACATCG CCCGCGTGCC CGTGATGGTC
GATTCCTCGA AGTTCGAGGT GATCGAGGCC GGCCTGAAAT GCATTCAGGG CAAGCCGATC
GTGAACTCGA TCTCGCTCAA GGAGGGCAAG GAGAAGTTCC TCACCGAGGC GCGGATCTGC
CGCGCCTACG GCGCCGCCGT GGTGGTGATG GCCTTCGACG AGCAGGGCCA GGCCGACACG
CTGGAGCGCA AGGTGGCGAT CTGCACCCGC GCCTACCGGA TCCTGACCGA GGAGGTCGGC
TTCCCGCCCG AGGACATCAT CTTCGACCCG AACATCTTCG CGGTCGCGAC CGGCATCGAG
GAGCATGACG GCTACGGCGT CGCCTTCATC GAGGCGGCCC GGCAGATCCG CGAGACCCTG
CCCCACGCCC ATATCTCGGG CGGGGTCTCG AACCTCTCCT TCGCGTTCCG CGGCAACGAG
CCGGTGCGCG AGGCCATGCA CGCGGTGTTC CTCTATCACG CCATCCGCGC CGGCATGGAC
ATGGGCATCG TCAATGCGGG CCAGCTCGCG GTCTACGACG AGCTCGACCC GGAGCTGCGC
GACCTCTGCG AGGACGTCGT CCTCAACCGC CGCCCCGACG CGACCGAGCG CCTCCTCGAG
CAGGCGGCGA AGTTCAAGGG CGGCGGCGCC CAGCTGCGCA CGGCCGACCT CGCTTGGCGC
GAGGCGCCGG TCGAGAAGCG GCTGGAGCAC GCCCTCGTCA ACGGCATCAC CGAGTACATC
GAGGCCGACA CCGAGGAGGC GCGCCGCACC GCGACCCGCC CCCTCGACGT GATCGAGGGC
CCGCTGATGG CCGGCATGAA CGTGGTCGGC GACCTCTTCG GCTCCGGCAA GATGTTCCTG
CCCCAGGTGG TGAAGTCGGC CCGCGTCATG AAGCAGGCCG TCGCCTACCT GATGCCCTTC
ATGGAGGAGG AGAAGCGGGC GAATGGCGGC ACCGGGCGCC AGGCCGCCGG CAAGGTGCTG
ATGGCCACCG TGAAGGGCGA CGTCCACGAC ATCGGCAAGA ACATCGTCGG GGTCGTGCTC
GCCTGCAACA ACTACGAGAT CATCGATCTC GGGGTGATGG TGCCGGCGGC CAAGATCCTC
GACACGGCCC GCAAGGAGAA GGTCGACATC GTCGGCCTCT CGGGCCTGAT CACGCCCTCG
CTCGACGAGA TGGTCCACGT CGCCTCCGAG ATGGAGCGCG AGGGGTTCGA GGTGCCGCTG
CTGATCGGCG GGGCCACGAC GAGCCGCGTG CACACGGCGG TGAAGATCCA CCCGGCCTAC
GCCAAGGGCC AGGCGGTCTA CGTGACCGAC GCGAGCCGCG CGGTCGGCGT GGTCTCGAGC
CTGCTCTCGC CCGAGACGAA GGCCGCGACG ATCGAGGGCG TGCGGGCGGA GTACAAGCGC
GTCGCCGAGG CGCATGCCAG GTCCGAGGCC GACAAGCAGC GCCTGCCGCT GGCCAAGGCC
CGCGCCAACC CGTTCCGGGC CGAGTTCTCG ACCTATCGCC CGGCGAAGCC CAGCTTCACG
GGCACCCGCG TCTTCCGCTC CTACGACGTG GCCGAGCTCG TCCCCTACAT CGACTGGACG
CCCTTCCTGC AGACCTACGA GTTCAAGGGC CGCTTCCCGG CGCTCCTGGA CGACCCGGTC
CAGGGCCCGG CGGCGCGCGC CCTGTTCGAC GACGCGCAGG CGATGCTGGC GCGGATCGTC
GAGGAGCGCT GGTTCAACCC GAAGGCGGTG ATCGGCTTCT GGCCGGCGAA CGCGGTCGGC
GACGACATCC GCCTGTTCAC GGGCGAGAGC CGCACCGACA GGCTCGCCAC CTTCCACGGC
CTGCGCCAGC AGCTCTCGAA GCGCGACGGG CGTCCCAATA CCTGCCTGTC GGACTTCGTC
GCCCCGCTCG ACTCCGGCGT TCCGGACTAC GTCGGCGGCT TCGTGGTCAC GGCGGGTCTG
GAGGAGGTGC GCATCGCCGA GCGCTTCGAG CGGCAGAACG ACGATTACCG CTCGATCCTG
GTCAAGGCTC TCGCCGACCG CATCGCCGAG GCCTTCGCCG AGCGGATGCA CGAGCGGGTG
CGCAAGGAGT TCTGGGGCTA CGCGGCCGAC GAGACTTTCG CGCCCGCCGA CCTCGTCTTG
GAGGAGTACC AGGGCATCCG CCCCGCGCCG GGCTACCCGG CCCAGCCCGA CCACACCGAG
AAGGCGACGC TGTTCGACCT CCTCCAGGCC GAGCCGCGGA TCGGCGTGAA GCTCACCGAA
TCCTACGCCA TGTGGCCGGG CTCCTCGGTC TCGGGCCTCT ACCTCGCGCA TCCCGGGGCG
CATTACTTCG GGGTCGCCAA GGTCGAGCGC GACCAGGTCG AGGATTACGC CGCCCGCAAG
GGCATGGACG TGGCTGAGGT GGAGCGCTGG CTCGGGCCGA TCCTCAACTA CGACCCGCGG
CGGCACCTCG CGGCGGCGGA GTAA
|
|---|
| Protein sequence | MTDLRPADGA NVLATLRKRA AERILVLDGA MGTMIQRLKL GEADFRGKRF LDHAHDQRGN
NDLLILTQPE AIRQIHLDYF LAGADVVETN TFSGTAIAQA DYGMEAIVRE LNREGARLAR
EAAVEAERRD GRRRFVAGAI GPTNRTLSIS PDVNNPGYRS VTFDQVRDAY AEQVRGLIEG
GSDLVLIETI FDTLNAKAAI AATWQVFGEM GVRLPIMISG TITDLSGRTL SGQTPSAFWH
SLRHAEPLTF GLNCALGARE MRAHISELSR VCDTLVCAYP NAGLPNEFGL YDESPEAMGA
LVGEFAGSGL VNMVGGCCGT TPDHIRAIAE AVAGKAPRRV PEVPRLMRLS GLEPFTLTKE
IPFVNVGERT NVTGSAKFRK LVTSGDYAAA LDVARDQVAA GAQVIDVNMD EGLLDSRAAM
VEFLNLVAAE PDIARVPVMV DSSKFEVIEA GLKCIQGKPI VNSISLKEGK EKFLTEARIC
RAYGAAVVVM AFDEQGQADT LERKVAICTR AYRILTEEVG FPPEDIIFDP NIFAVATGIE
EHDGYGVAFI EAARQIRETL PHAHISGGVS NLSFAFRGNE PVREAMHAVF LYHAIRAGMD
MGIVNAGQLA VYDELDPELR DLCEDVVLNR RPDATERLLE QAAKFKGGGA QLRTADLAWR
EAPVEKRLEH ALVNGITEYI EADTEEARRT ATRPLDVIEG PLMAGMNVVG DLFGSGKMFL
PQVVKSARVM KQAVAYLMPF MEEEKRANGG TGRQAAGKVL MATVKGDVHD IGKNIVGVVL
ACNNYEIIDL GVMVPAAKIL DTARKEKVDI VGLSGLITPS LDEMVHVASE MEREGFEVPL
LIGGATTSRV HTAVKIHPAY AKGQAVYVTD ASRAVGVVSS LLSPETKAAT IEGVRAEYKR
VAEAHARSEA DKQRLPLAKA RANPFRAEFS TYRPAKPSFT GTRVFRSYDV AELVPYIDWT
PFLQTYEFKG RFPALLDDPV QGPAARALFD DAQAMLARIV EERWFNPKAV IGFWPANAVG
DDIRLFTGES RTDRLATFHG LRQQLSKRDG RPNTCLSDFV APLDSGVPDY VGGFVVTAGL
EEVRIAERFE RQNDDYRSIL VKALADRIAE AFAERMHERV RKEFWGYAAD ETFAPADLVL
EEYQGIRPAP GYPAQPDHTE KATLFDLLQA EPRIGVKLTE SYAMWPGSSV SGLYLAHPGA
HYFGVAKVER DQVEDYAARK GMDVAEVERW LGPILNYDPR RHLAAAE
|
|---|
| |