Gene M446_4330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4330 
Symbol 
ID6133213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4771845 
End bp4773662 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content75% 
IMG OID641644469 
Productlipid ABC transporter ATPase/inner membrane protein 
Protein accessionYP_001771107 
Protein GI170742452 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR02204] ABC transporter, permease/ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.630595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCG ACGACACAGC CCGCTCCCGG GCCACGCTTC CCCGGGCCTC TCTCGGCGCG 
CTGAAACCGC TCATCCCCTT CGCCCTGCGC TACCGCGGCC GCATCGCCGC GGCCCTCGTC
GCCCTGGTGG CGGCCGCCGG CGCCACCCTG GTCGTGCCGA TCGCGATCCG CCGGGTCGTC
GATCTCGGCT TCGCGCACCA GGGTGCCGCG ATGATCGACG CCTATTTCGG CGCGCTGATC
GGCGTCGTCG GTCTCCTCGC GCTGGCGAGC GCGGGCCGCT ACTACTTCGT CGTGACGCTC
GGCGAGCGGG TGATCGCGGA CCTGCGGGCG GCGGTGTTCG CGCGGCTGAC GGTGCTCGAC
CCCGCCTTCT TCGACCAGGC CCGCAGCGGC GAACTGGTCT CGCGCCTCAC GGCCGACGCC
GCGCAGGTGA AGTCGGTCTT CGGGGTCTCC CTGTCGATCC TCCTGCGCAA CGCCTTCCTG
TTCCTGGGCG CGGTCGCCAT GATGGTGTGG ACGAGCCCGC GCCTCTCGGT CCTGGTCCTG
GCCGCGATCC CGGTCATCGT CTTCCCGCTC ATCCTCTCGG GGCGGGGCGT GCGGCGCCGC
TCGCGGGCCG CGCAGGACCG GCTCGCCGAC GCCTCCGCCT ACGCGACCGA GGCGGTCGGG
GCCGTGCGCA CCATGCAGGC CTTCGGGATG GGGCCGGCGA CGGCGGCGCG CTTCGCGGCC
GCCTCGGAGC AGGCCTTCCT CGCCGCCCGC GGCTCGGCGC GGGCGCGGGC GCTCCTCACC
GGCGTCGCCA TCTTCCTGGT CTCGGCGAGC GTGGTCGGGG TGCTGTGGTA CGGGGCGCAG
GGCGTCGCGC GCGGCACGAT GACGGCGGGC CAGCTCTCGC AATTCGTCCT CTACGCGGTG
TTCGGGGCGA GCGCCCTCGG CCAGCTCTCC GAGGTCTACG GGGAGCTCAC CCTGGCGGCC
GGCGCCGCCG AGCGCCTGGG CGAGATCCTG CGCACGGAGC CGGCCATCAC CGCCCCGGCG
GATCCCCTGG CCCTGCCGGA GCCGCCCCGC GGCGAGGTCG CCTTCGAGCG GGTGCGCTTC
GCCTACCCGG CGCGGCCGGA CCGCAGCGCC CTCCACGACG TCAGCTTCAC GGTGGCGCCC
GGCGAGCGCG TCGCCATCGT GGGCCCGTCC GGCGCGGGCA AGAGCACGGT GCTGCAGCTG
CTCCTGCGCT TCTACGATCC CGATTCGGGA CAGGTGCGGG TGGACGGCAT CCCGGTGAAC
CGGGCCGATC CGGACGCGCT GCGGCGGCGC CTGTCCCTGG TGCCGCAGGA TCCGACCGTG
TTCAGCGGCA GCGTCCTCGA CAACATCCGC TACGGCCGCC CGCAGGCCAG CGAGGCCGAG
GTGACCGCCG CCGCCGCCCA GGCCCACGCG GACGGGTTCA TCCGCGCCCT GCCGGAGGGC
TACGCCACGC TGGTGGGCGA GCGGGGCGTC ACCCTGTCGG GCGGGCAGCG CCAGCGCATC
GCCATCGCCC GGGCGATCCT CAAGGACGCG CCGATCCTGC TCCTCGACGA GGCGACCTCG
GCCCTCGACG CGGAGAGCGA GCGCGCGGTC CAGGCGGGCC TCGACGAGCT GATGCGCGGG
CGCACCACCC TGGTGATCGC CCACCGCCTC GCGACCATCC GGGCCGCCAA CCGGATCCTC
GTCCTCGACG ACGGCCGCGT GGTGGAAGAG GGCACACACG ACGGGCTGCT CGCCCGGGGC
GGCCTCTACG CCCAGCTCGC CGCCCTCCAG TTCGGCGATG CCGGGGGAGA GGGCCGGGCG
CGGCTCGTGG CGGTGTAG
 
Protein sequence
MASDDTARSR ATLPRASLGA LKPLIPFALR YRGRIAAALV ALVAAAGATL VVPIAIRRVV 
DLGFAHQGAA MIDAYFGALI GVVGLLALAS AGRYYFVVTL GERVIADLRA AVFARLTVLD
PAFFDQARSG ELVSRLTADA AQVKSVFGVS LSILLRNAFL FLGAVAMMVW TSPRLSVLVL
AAIPVIVFPL ILSGRGVRRR SRAAQDRLAD ASAYATEAVG AVRTMQAFGM GPATAARFAA
ASEQAFLAAR GSARARALLT GVAIFLVSAS VVGVLWYGAQ GVARGTMTAG QLSQFVLYAV
FGASALGQLS EVYGELTLAA GAAERLGEIL RTEPAITAPA DPLALPEPPR GEVAFERVRF
AYPARPDRSA LHDVSFTVAP GERVAIVGPS GAGKSTVLQL LLRFYDPDSG QVRVDGIPVN
RADPDALRRR LSLVPQDPTV FSGSVLDNIR YGRPQASEAE VTAAAAQAHA DGFIRALPEG
YATLVGERGV TLSGGQRQRI AIARAILKDA PILLLDEATS ALDAESERAV QAGLDELMRG
RTTLVIAHRL ATIRAANRIL VLDDGRVVEE GTHDGLLARG GLYAQLAALQ FGDAGGEGRA
RLVAV