Gene M446_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4252 
SymbolhrcA 
ID6132256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4692892 
End bp4693995 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content71% 
IMG OID641644396 
Productheat-inducible transcription repressor 
Protein accessionYP_001771035 
Protein GI170742380 
COG category[K] Transcription 
COG ID[COG1420] Transcriptional regulator of heat shock gene 
TIGRFAM ID[TIGR00331] heat shock gene repressor HrcA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC GAGATCCTCC TCCCCTGCCT GCCGGCTCAG GCCAAGCCCG CAGCCTCGCC 
GAGTTGAACG AGCGCTCGCG CGAGATCTTC CGCCAGATCG TCGAGAGCTA CCTGGCGACG
GGCGAGCCGG TGGGCTCGCG CAACCTCGCC CGCATCCTGC CGATGACGCT GTCGCCGGCC
TCCGTGCGCA ACGTCATGGC GGACCTCGAA CAGGCGGGCC TGATCTACGC CCCGCACACC
AGCGCGGGGC GTCTGCCGAC CGAGACGGGC CTGCGCTTCT TCGTCGACGC GCTGCTCGAA
CTCGGGGATG TCGGCCAGGA GGAGCAGGGG CGGATCGAGG CGCAGATGCG CGCCGCCGCC
TCCCGCCACA CCTTCGAGAC CGCGCTCACG GAGGCGACCG TGATGCTGTC GGGCATCTCG
CGGGGGGCGG GGGTCGTGGT CACGACGAAG CAGAACGCCA ACCTGCGCCA CATCGAGTTC
GTGCGGCTCG ATCCCGGGCG CGCCCTGGTG GTGCTCGTCT CCGAGGACGG CTCGGTGGAG
AACCGCCTCG TCGACCTGCC CCTCGGGCTC CCGTCCGGCG CCCTGCAGGA GGCGTCGAAC
TTCCTCAACG CCCGCATCCG GGGCCGGACG CTCGGCGAGG TGCGCGCCGA GATCGAGACC
GGGCGCGAGG CGATGAAGCG GGAACTCGAC GCCCTCACCG AGCGGCTCGT CGAGGCGGGG
CTCGCCCGCT CGGTCGGGCC CTCCGACGAG CGCCAGCTGA TCGTCCGCGG GCAGGCCAAC
CTGCTGGAGG ATCTGCGCGC CGCCGAGGAT CTGGAGCGGA TCCGCCTGCT GTTCAGCGAC
CTGGAGAGCC AGAAGGACGT CATCGACCTC CTCACGCGCG CCGAGGGCGG CGAGGGCGTG
CGCATCTTCA TCGGCTCGGA GAACAAGCTG TTCTCGCTCT CCGGCTCCTC GATGATCGCC
GCGCCGTTCC GGGACGGCCG CCAGAAGATC GTCGGGGTCG TCGGCGTGAT CGGTCCGACC
CGGCTCAACT ACGCCCGCAT CGTGCCGATG GTGGACTTCA CCGCCCGGCT CGTCTCCCGG
ATGCTGGAGA GCGGCCGGGC GTGA
 
Protein sequence
MNTRDPPPLP AGSGQARSLA ELNERSREIF RQIVESYLAT GEPVGSRNLA RILPMTLSPA 
SVRNVMADLE QAGLIYAPHT SAGRLPTETG LRFFVDALLE LGDVGQEEQG RIEAQMRAAA
SRHTFETALT EATVMLSGIS RGAGVVVTTK QNANLRHIEF VRLDPGRALV VLVSEDGSVE
NRLVDLPLGL PSGALQEASN FLNARIRGRT LGEVRAEIET GREAMKRELD ALTERLVEAG
LARSVGPSDE RQLIVRGQAN LLEDLRAAED LERIRLLFSD LESQKDVIDL LTRAEGGEGV
RIFIGSENKL FSLSGSSMIA APFRDGRQKI VGVVGVIGPT RLNYARIVPM VDFTARLVSR
MLESGRA