| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4243 |
|---|
| Symbol | |
|---|
| ID | 6133051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4679654 |
|---|
| End bp | 4681471 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641644387 |
|---|
| Product | DNA polymerase III, subunits gamma and tau |
|---|
| Protein accession | YP_001771026 |
|---|
| Protein GI | 170742371 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00557596 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA CCACCGGCAC GCCCTCGACC GACGAGCCGG GTTTCCCGGG TTTGGCCCCG
CCGGCGGCGC CGGCCGCCGC GCCCTACCGG GTGCTGGCGC GCAAGTACCG CCCCCAGAGC
TTCGACGACC TGATCGGCCA GGGTGCCATG GTGCGCACCC TGGCGAACGC CTTCGAGGCC
GGGCGCATCC CGCAGGCCTG GATGCTCACC GGCGTGCGCG GGGTGGGCAA GACCACCACC
GCCCGCATCC TGGCGCGCGG GCTCAACTAC GCCCTCGCCG GGGACGCGAA GGCCGGCCCG
ACGATCCGGA TGCCGACGCT CGGCCTGCAT TGCGCGGCGA TCATGGAATC CCGGCACATC
GACGTGCTGG AGATGGACGC CGCCTCCCAT ACCGGCATCG ACGACGTCCG CCAGATCATC
GACGGCATCC GCTACGCCCC GGTCTCGGCG CGCTACAAGG TCTACATCGT CGACGAGGTC
CACATGCTGT CCGAGAAGGC GTTCAACGCC TTCCTGAAGA CGCTGGAGGA GCCCCCGCCG
CACGCGAAAT TCGTCTTCGC CACCACCGAG ATCCGCAAGG TTCCGGTGAC GATCCTGTCG
CGCTGCCAGC GCTTCGACCT GCGCCGGGTC GAGGCGGGCA CGCTCGTCGC CCACCTGCAC
AGGATCTGCG ACGCCGAGGG CGTGGCGGTG GAGCCCGAGG CGCTCGCCGC CATCGCGCGG
GCGGCGGAGG GCTCGGTGCG CGATTCGCTC TCCCTCCTCG ACCAGGCGAT CGCGCACGGC
GCGGGCCGGG TCACGGCCGA GACCGTGCGC GACATGCTCG GCCTCGCCGA CCGGGCGCGG
ATCATCGACC TGTTCGAGGC CGCCATGCGG GGCGACGCGC CCGCGGCCTT CGCGGAACTG
CACGGTCAGT ACGAGGCCGG CGCCGATCCC GCGGTGGTGC TGCAGGACCT CGCCGGCTTC
ACGCACCTCG TCACCCGCCT GAAGGTCGCG CCCGAGACCG CCCGCGCCGA CACCGCCCTG
AGCGAGGCCG AGCGGGGCCG CGGCAGCGAC TTCGCGGACC GGCTCTCGGT GCGGGCCCTG
TCGCGGGCGT GGCAGATCCT GCTCAGGGCG ATTCCCGAGG TGCAGGCGGC GCCCCGTCCC
CTCGCGGCGG CCGAGATGGC GCTGGTGCGC CTGATCTACG CCGCCGACCT GCCGACCCCG
GACGAGGCCC TGCGGCAGGT GCGGGAAGGC GGCGGCGCGG CGGTCCCGCC CGCCGGCCGC
CCTCTGCCCG CCGCCCCGCC CGGCCCCGCC CTGCGCGCCC TGCCGGACGC CCGCCCCGCG
CAATCCGCCG CGGCGGCCCG CCCGGCCGCC GCCCCGGCGC AGGCGCAGCA CGCGGCCGAG
CCGGCCCTGC GGCTGCGGCG CTTCGAGGAC GTGGTGGCGC TCGCGGAGGC CAAGCGCGAC
ATCGGCCTCA AGGCCGCCCT GGAGCGCGAC GTGCACCTCG TGCGCTTCGA GGAGGGCCGC
ATCGAGTTCC GCCTCGCCGA GGCGGGCCGC CCGAGCCTCG CCAACGACCT CGCCCGCGCC
CTCGACCTCT GGACGGGGCG GCGCTGGGTG GTGGCCCTGT CGCGGGAGAC CGGCGAGGCG
ACGCTGGCGG CCCGGGCCGA GGCCGCCCGC GAGAGCCGCC ACCAGGGCGC GGCGGCGCAT
CCCCTGGTGC AGGAGGTGCT GAAGCGCTTC CCGGGCGCCC AGATCGTGGA TGTGCGGGAG
AGGCCGCCCG AGGCACCCGC CGAGGAATTC AGCCCCGAGG AATTCAGCGC CCCGGAGGAG
CCGGAGGCGG ACCAGTAG
|
|---|
| Protein sequence | MDETTGTPST DEPGFPGLAP PAAPAAAPYR VLARKYRPQS FDDLIGQGAM VRTLANAFEA
GRIPQAWMLT GVRGVGKTTT ARILARGLNY ALAGDAKAGP TIRMPTLGLH CAAIMESRHI
DVLEMDAASH TGIDDVRQII DGIRYAPVSA RYKVYIVDEV HMLSEKAFNA FLKTLEEPPP
HAKFVFATTE IRKVPVTILS RCQRFDLRRV EAGTLVAHLH RICDAEGVAV EPEALAAIAR
AAEGSVRDSL SLLDQAIAHG AGRVTAETVR DMLGLADRAR IIDLFEAAMR GDAPAAFAEL
HGQYEAGADP AVVLQDLAGF THLVTRLKVA PETARADTAL SEAERGRGSD FADRLSVRAL
SRAWQILLRA IPEVQAAPRP LAAAEMALVR LIYAADLPTP DEALRQVREG GGAAVPPAGR
PLPAAPPGPA LRALPDARPA QSAAAARPAA APAQAQHAAE PALRLRRFED VVALAEAKRD
IGLKAALERD VHLVRFEEGR IEFRLAEAGR PSLANDLARA LDLWTGRRWV VALSRETGEA
TLAARAEAAR ESRHQGAAAH PLVQEVLKRF PGAQIVDVRE RPPEAPAEEF SPEEFSAPEE
PEADQ
|
|---|
| |