Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4240 |
Symbol | |
ID | 6133048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4677906 |
End bp | 4678427 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641644384 |
Product | peptide deformylase |
Protein accession | YP_001771023 |
Protein GI | 170742368 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.003685 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCATCC GCCCCCTCGT CATCCTTCCG GACGCGCGCC TGCGCGTGAC CTCCTCACCG GTCGGCACGA TCACGGGCGA GGTGCGCAAG CTCGCGGCCG ACATGCTGGA GACGATGTAC GACGCCCCGG GCGTCGGCCT CGCGGCGATC CAGGTCGGCG AGCCGACCCG CATCGTGACC ATCGATACCT CGAAGGACAA GGAGGCGCGC ACCCCCCTCG TGCTGATCGA CCCGGAGATC GTCTGGTCCT CCGAGGAGAC CCGCGCCTAC GAGGAGGGCT GCCTGTCGAT CCCCGAATAC TACGCCGAGG TGGTGCGGCC CGACCGGGTG CGGGTCCGCT TCCGCACCCT CGACGGCGAG ACCGTGGAGC AGGAGGCGGA CGGGCTCCTC GCCACCTGCC TCCAGCACGA GCTCGACCAC CTCAACGGGG TGCTCTTCAT CGACCACATC TCGAAGCTGA AGCGCGACCG GGTGATGAAG AAATTCGCCA AGGCGGCCAA GCGCGGCCAG GAAGCGGCCT GA
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Protein sequence | MTIRPLVILP DARLRVTSSP VGTITGEVRK LAADMLETMY DAPGVGLAAI QVGEPTRIVT IDTSKDKEAR TPLVLIDPEI VWSSEETRAY EEGCLSIPEY YAEVVRPDRV RVRFRTLDGE TVEQEADGLL ATCLQHELDH LNGVLFIDHI SKLKRDRVMK KFAKAAKRGQ EAA
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