Gene M446_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4240 
Symbol 
ID6133048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4677906 
End bp4678427 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID641644384 
Productpeptide deformylase 
Protein accessionYP_001771023 
Protein GI170742368 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.003685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATCC GCCCCCTCGT CATCCTTCCG GACGCGCGCC TGCGCGTGAC CTCCTCACCG 
GTCGGCACGA TCACGGGCGA GGTGCGCAAG CTCGCGGCCG ACATGCTGGA GACGATGTAC
GACGCCCCGG GCGTCGGCCT CGCGGCGATC CAGGTCGGCG AGCCGACCCG CATCGTGACC
ATCGATACCT CGAAGGACAA GGAGGCGCGC ACCCCCCTCG TGCTGATCGA CCCGGAGATC
GTCTGGTCCT CCGAGGAGAC CCGCGCCTAC GAGGAGGGCT GCCTGTCGAT CCCCGAATAC
TACGCCGAGG TGGTGCGGCC CGACCGGGTG CGGGTCCGCT TCCGCACCCT CGACGGCGAG
ACCGTGGAGC AGGAGGCGGA CGGGCTCCTC GCCACCTGCC TCCAGCACGA GCTCGACCAC
CTCAACGGGG TGCTCTTCAT CGACCACATC TCGAAGCTGA AGCGCGACCG GGTGATGAAG
AAATTCGCCA AGGCGGCCAA GCGCGGCCAG GAAGCGGCCT GA
 
Protein sequence
MTIRPLVILP DARLRVTSSP VGTITGEVRK LAADMLETMY DAPGVGLAAI QVGEPTRIVT 
IDTSKDKEAR TPLVLIDPEI VWSSEETRAY EEGCLSIPEY YAEVVRPDRV RVRFRTLDGE
TVEQEADGLL ATCLQHELDH LNGVLFIDHI SKLKRDRVMK KFAKAAKRGQ EAA