| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4221 |
|---|
| Symbol | |
|---|
| ID | 6135423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4659130 |
|---|
| End bp | 4659618 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641644365 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_001771004 |
|---|
| Protein GI | 170742349 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.567617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0594421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTCG CCCTCGTGGC CGTCGGCCGC CTGAAGCGCG GCCCGGAGCG GGACCTCGCC
GAGGGCTACC GCGCGCGGGC CGACGCGCTG GCGCGGGGCC TCGGCCTGTC CGCGGTCCAG
CTCACCGAAT TGCCGGAGAG CCGCGCCCGC CGCGCCCCGG ACCGCTGCGC CGAGGAGGGC
GCGGCGATCC TCGCCTGCCT GCCGGCCGGG AGCGCCGTCA TCGTGATGGA CGAGGGCGGC
AGGGCGGTGA CGAGCGCCGG GCTGGCCGAG CAGGTGGCCG CGTGGCGCGA CGGCGGCCGG
CCCGGTCTCA CGATCGTGAT TGGCGGGGCC GACGGGCTGT GCGAGAGCGT GCGGCACCGG
GCCGACCTCG TCTTCGCCTT CGGGGCCGCC ACGCTCCCGC ACGGCCTGGT CAGGGTGTTG
GTGCTTGAGC AACTATATCG CGTCATGACC ATCCTGGCCG GCCACCCCTA TCACCGCGGC
GCCCCGTGA
|
|---|
| Protein sequence | MRLALVAVGR LKRGPERDLA EGYRARADAL ARGLGLSAVQ LTELPESRAR RAPDRCAEEG
AAILACLPAG SAVIVMDEGG RAVTSAGLAE QVAAWRDGGR PGLTIVIGGA DGLCESVRHR
ADLVFAFGAA TLPHGLVRVL VLEQLYRVMT ILAGHPYHRG AP
|
|---|
| |