Gene M446_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4040 
Symbol 
ID6128942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4507188 
End bp4507535 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content76% 
IMG OID641644195 
Producttransthyretin 
Protein accessionYP_001770835 
Protein GI170742180 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.369839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGG GCGGGATCTC GGTCCACGCG GTGGACGTGG CGACGGGGCG GCCGGCGGCG 
GGGCTGCGGG TGACCGTCGA GGCGCTCGAC CCGGCCGGGC GGCGGCTGGT GGCGGAGGGC
CGGATCGGCC CGGACGGCCA CCTGCCCCAC CCGATCTCCG GCGGGGCGGG CGTGACGGCG
GGGATCTACG AGGTCACCTT CGACGTCGGC GACTATCTCG CCCCGGAGGG GGGCGGGCGC
TTCCTCGACC GGGTGCCGTT CCGCTTCACG ATCGAGGACG TGGCCGCGCA CGTCCACCTG
CCCCTCAAGT TCACGCGCTT CGGCTACGCC CTGTTCCGCG GCGCGTGA
 
Protein sequence
MRAGGISVHA VDVATGRPAA GLRVTVEALD PAGRRLVAEG RIGPDGHLPH PISGGAGVTA 
GIYEVTFDVG DYLAPEGGGR FLDRVPFRFT IEDVAAHVHL PLKFTRFGYA LFRGA