Gene M446_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4030 
Symbol 
ID6132881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4495488 
End bp4496708 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID641644187 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001770827 
Protein GI170742172 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR02622] CDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TGTCTTTCTG GTCCGGCAAG CGCGTCCTCG TCACCGGTTC GGCCGGGTTC 
CTCGGCTCGT GGACGGTGCG GACCTTGCGC GAGAGCGGCG CATTGGTGGT CGGCTACGTG
CGCGACCTCA ATGCCTACGG AAATTCGCTG GCGGATGACT TGGCCAAGCC GACCATCGTC
GTGCACGGCC GGCTGGAGGA TCGGGAGACC CTGCGGCGTG CCGTGAACGA GCACGAGGTG
GACACGGTGA TCCACCTCGC CGCTCAGCCG ATCGTCGGCA CGGCCCTGCG CGATCCGGTG
GGCACCTTCG AGGCCAACAT TCGGGGTACC TGGAACCTGC TCGACGCCTG CCGGCTGTAC
GGGAAGGTCG AACGCATCCT CGTCGCGTCC AGTGACAAGA GCTACGGCAG TTCCGACGTC
CTTCCCTATA CGGAAGACAT GCCGCTTGTC GGGCGCGCAC CCTACGACGT CTCCAAGAGC
TGCACCGACC TCCTGGCGCG CAGCTACTTC GAGACCTACG GCCTGCCGAT CTGCATCACG
CGGGCCGGCA ACTTCTTCGG CGGAGGCGAC CTCAACTTCA ACCGGCTGGT GCCCGGGACG
ATCCGCTGGG CGCTGCGGGG CGAGCGCCCC GTGCTGCGCT CGGACGGCAC GATGATCCGC
GACTACATCT ACGTCCGGGA CGTCGTGGCC GGATACCTCG CCATCGGCGA GGCCATGCAC
GAGCCGGGCG TGGCCGGCGA GGCCTTCAAC CTGTCGAACG AGACGCCCCT CAGCACGATG
GCCTTCACCC ACGAGATCCT CCGCGCCTGC CGGCGCCCGG ATCTCGAACC GCTGGTCCTG
GGCGAGGCCC GGTCGGAGAT CGACGCCCAG CACCTCAGCG CCGCGAAGGT CCGGCGGATC
GTCGGCTGGT CGCCGCGGTG GAGCATGGCG GACGCCCTGG CGGAAACCGT CGCCTGGTAC
CGGAACTACA TGGGCCGGAT CGGTGAGATC GAACGGGAAG CCCCTCCGCA CGATGGCCTT
CGCCAACGCG ATCCTCAGCG CCTGCCGGCG CCCGGATCTC GCACCGCTGG TCCTGGGCGA
GGCCCGGTCG GAGATCGACG CCCGGCACCT CAGCGCCGCG AAAGTCCGGC GGACCGTCGG
CTGGTCGCCG CGGTGGAGCA CGGCGGACGC CCTGGCGGAA ACCGTCGCCT AGCCCCGGAA
CTCCATCGGC CGGATCGGTG A
 
Protein sequence
MSKMSFWSGK RVLVTGSAGF LGSWTVRTLR ESGALVVGYV RDLNAYGNSL ADDLAKPTIV 
VHGRLEDRET LRRAVNEHEV DTVIHLAAQP IVGTALRDPV GTFEANIRGT WNLLDACRLY
GKVERILVAS SDKSYGSSDV LPYTEDMPLV GRAPYDVSKS CTDLLARSYF ETYGLPICIT
RAGNFFGGGD LNFNRLVPGT IRWALRGERP VLRSDGTMIR DYIYVRDVVA GYLAIGEAMH
EPGVAGEAFN LSNETPLSTM AFTHEILRAC RRPDLEPLVL GEARSEIDAQ HLSAAKVRRI
VGWSPRWSMA DALAETVAWY RNYMGRIGEI EREAPPHDGL RQRDPQRLPA PGSRTAGPGR
GPVGDRRPAP QRRESPADRR LVAAVEHGGR PGGNRRLAPE LHRPDR