Gene M446_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4027 
Symbol 
ID6132878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4489832 
End bp4491946 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content73% 
IMG OID641644184 
ProductAlpha-L-arabinofuranosidase-like protein 
Protein accessionYP_001770824 
Protein GI170742169 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3534] Alpha-L-arabinofuranosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCACG TCCGAATCCT CGCGGCCGGC GGCGCCCTGT GCGCCGCGCT GCTCGGCCTC 
TTCCTGGTCA CGGCGCAGCC GGCGCTGGGC CTGCGGCTCG CCAATGCGGA TTTCGAACAG
GAGGGATCGC CGCCCCCCGG CTGGAGCCAG GACGGCCAGA CCGCCGACAA GGGCGAGGTC
CGTCAGGTCA CGGTCGCGGG TGGGCAGGGC CGCACCCTCG CCCTGTCGCC GAACCGCCGC
AATCGCGGCG GCGACAAGCC GCTCGGCCTC GGCCAAGTCA TCGAGGCGGC GGATCTCAGC
GGCCGGCCGC TCACGCTGCG GGCCCGCCTC GGAGCGGAGG GCGGCGCGGC CGCGGTCGTC
GGCGTCGCGT TCCTCGACGG GAGCGGTGCC GACGTCGGAG CGCGCCTCGT CCTGCGCGCC
GCCGCCGCGC CGCCCCTGAG CGTGCAATCC ATCCGCTCCG ACGAGGCCGT CCCGGCAGCG
GCCCGGCAGG CGATCGTGTT CCTCGTCGCC GAGGGCCAGG CCGGGACCGC CTATTTCGAC
GATATCGAGC TCGTGTCGGA GGTGACGCCG GCGGTCGCGC CGGCCCGGGG CCGCCCCGTC
GCGGCCCGCG TCTCCCTCGT CCCGGGCGAG GATCTCGGTC CCGTGCGCCG GCATCTGTTC
GGCGCCAATG TCGAGTGGAT CCGCAACGCG CAGGGGCTGT GGAACCCCGC GACCCGCTCG
CTCGACGCGG ATATGCTGGC GCTCGCCAAG GCCGCGGGCG TGAGCGTCCT GCGCTTTCCG
GGAGGGGGCT GGTCGGACAG CTATGACTGG CGCAACGGCG TCGGTCCCCA GGCGAGCCGG
CCGCGCTCCC AGCATGCCCC GGGCGAGCCG GAGGAATCGC CCAACGTCAT CGGCACGGAC
GAGATCATCG AGGCCGCGCG ACGGATCGAT GCGGACCTGC TGATCACCTT GAACCTCGGC
AGCGGCACGC CCGCGCTCGC GGCCGAGTGG GCGCGCTACG TCCGCGCGCG CATCGGCCCT
GATGCCCGAC CGCGCGTCAC CTGGGAGCTC GGCAACGAGC TCTACATGGA GCAGGACATC
TCCCGAGGGC AAACCGACCC GCAGACCTAT GTGCAGCGCG CCCGCGCGAC CATCGCGGCC
GTGCGGGCGG TGGATCCCGC GGCGCGCTTC TACGCCATCG GCCTGGAGAA TTTCGGGCGC
TACCGCTTCA ACGCCCATCG GGGCTGGAAC GACACGGTGC TGACCGCGCT CGCCGCGGAG
ATCGATGGGC TGGCGATCCA TAACGGCTAC GCGCCCCTGC TGCCGGGTCC GGAGGGCGGC
AGCGCCGCAT CGGTCTACCG GGCCATGCTG GCAGCGCCGG CCAACATGGC GGCGAACCTC
GTCACGACGA TGCGGCAGCT GCACTCCGTG CAGGCCGGGC GCCGGCTCAC GCTGGCCGTC
ACCGAGTGGG GACCGCTCTT CGCCGTCGAT CCGGCCAACC GGTATTTCGA CCACGTGAAG
ACCCTGGGGT CCGGCCTGTA CGTGGCGCGG GTCCTCAACG TCCTGCTGCG GACGCCCGGC
GTCGCGGAAG CCGAGTTCTT CAAGCTCAGT GACCTGCTGA ATGCGGGCTG GATCGGCCGC
AAGGTCGGCG GCGGCTACGC GGCGACGCCC GCCCTCGAGG TGCTGCGCCT CTACGCTTCG
AACCTGTCGG GCCGCCTGAT CGGCACCCGC GTGGACGGCC CGACATTCTC CGGCGGCCCG
ATCGGCTTCA TCGACAGGGT CGACGCTGCC TCCACGGTCG AGGCCGTGGC CTCGCTCACC
GAGTCGGGCG AACTCGCCAT CCTGCTCTCG AACGCGAGCC TCGAGGCGCC CGCGGAGATC
GAGCTCGACC TCGACCGGTC GCGCGCAGGA TCGATGGAGA TCCTGAGCGG GCCCGCCCCC
GACGCAACCC GCGGCACCGG CATGATTTCG GTTCCAGGCC TGTCCTTCGC GCAGACCGCC
GATTTCGGCG CCCCGCGCCC GCACGGCCGG GACGAGATCA CGCTCGCGAC CCGGCCCGTC
GCGCCGGGCG CGCGCCTCCG CCTCGTCCTG CCGCCCGTAT CGGTCGCGGC GCTTCGCTTG
GGGGCGGCCC GATGA
 
Protein sequence
MRHVRILAAG GALCAALLGL FLVTAQPALG LRLANADFEQ EGSPPPGWSQ DGQTADKGEV 
RQVTVAGGQG RTLALSPNRR NRGGDKPLGL GQVIEAADLS GRPLTLRARL GAEGGAAAVV
GVAFLDGSGA DVGARLVLRA AAAPPLSVQS IRSDEAVPAA ARQAIVFLVA EGQAGTAYFD
DIELVSEVTP AVAPARGRPV AARVSLVPGE DLGPVRRHLF GANVEWIRNA QGLWNPATRS
LDADMLALAK AAGVSVLRFP GGGWSDSYDW RNGVGPQASR PRSQHAPGEP EESPNVIGTD
EIIEAARRID ADLLITLNLG SGTPALAAEW ARYVRARIGP DARPRVTWEL GNELYMEQDI
SRGQTDPQTY VQRARATIAA VRAVDPAARF YAIGLENFGR YRFNAHRGWN DTVLTALAAE
IDGLAIHNGY APLLPGPEGG SAASVYRAML AAPANMAANL VTTMRQLHSV QAGRRLTLAV
TEWGPLFAVD PANRYFDHVK TLGSGLYVAR VLNVLLRTPG VAEAEFFKLS DLLNAGWIGR
KVGGGYAATP ALEVLRLYAS NLSGRLIGTR VDGPTFSGGP IGFIDRVDAA STVEAVASLT
ESGELAILLS NASLEAPAEI ELDLDRSRAG SMEILSGPAP DATRGTGMIS VPGLSFAQTA
DFGAPRPHGR DEITLATRPV APGARLRLVL PPVSVAALRL GAAR