Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4027 |
Symbol | |
ID | 6132878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4489832 |
End bp | 4491946 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641644184 |
Product | Alpha-L-arabinofuranosidase-like protein |
Protein accession | YP_001770824 |
Protein GI | 170742169 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3534] Alpha-L-arabinofuranosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCACG TCCGAATCCT CGCGGCCGGC GGCGCCCTGT GCGCCGCGCT GCTCGGCCTC TTCCTGGTCA CGGCGCAGCC GGCGCTGGGC CTGCGGCTCG CCAATGCGGA TTTCGAACAG GAGGGATCGC CGCCCCCCGG CTGGAGCCAG GACGGCCAGA CCGCCGACAA GGGCGAGGTC CGTCAGGTCA CGGTCGCGGG TGGGCAGGGC CGCACCCTCG CCCTGTCGCC GAACCGCCGC AATCGCGGCG GCGACAAGCC GCTCGGCCTC GGCCAAGTCA TCGAGGCGGC GGATCTCAGC GGCCGGCCGC TCACGCTGCG GGCCCGCCTC GGAGCGGAGG GCGGCGCGGC CGCGGTCGTC GGCGTCGCGT TCCTCGACGG GAGCGGTGCC GACGTCGGAG CGCGCCTCGT CCTGCGCGCC GCCGCCGCGC CGCCCCTGAG CGTGCAATCC ATCCGCTCCG ACGAGGCCGT CCCGGCAGCG GCCCGGCAGG CGATCGTGTT CCTCGTCGCC GAGGGCCAGG CCGGGACCGC CTATTTCGAC GATATCGAGC TCGTGTCGGA GGTGACGCCG GCGGTCGCGC CGGCCCGGGG CCGCCCCGTC GCGGCCCGCG TCTCCCTCGT CCCGGGCGAG GATCTCGGTC CCGTGCGCCG GCATCTGTTC GGCGCCAATG TCGAGTGGAT CCGCAACGCG CAGGGGCTGT GGAACCCCGC GACCCGCTCG CTCGACGCGG ATATGCTGGC GCTCGCCAAG GCCGCGGGCG TGAGCGTCCT GCGCTTTCCG GGAGGGGGCT GGTCGGACAG CTATGACTGG CGCAACGGCG TCGGTCCCCA GGCGAGCCGG CCGCGCTCCC AGCATGCCCC GGGCGAGCCG GAGGAATCGC CCAACGTCAT CGGCACGGAC GAGATCATCG AGGCCGCGCG ACGGATCGAT GCGGACCTGC TGATCACCTT GAACCTCGGC AGCGGCACGC CCGCGCTCGC GGCCGAGTGG GCGCGCTACG TCCGCGCGCG CATCGGCCCT GATGCCCGAC CGCGCGTCAC CTGGGAGCTC GGCAACGAGC TCTACATGGA GCAGGACATC TCCCGAGGGC AAACCGACCC GCAGACCTAT GTGCAGCGCG CCCGCGCGAC CATCGCGGCC GTGCGGGCGG TGGATCCCGC GGCGCGCTTC TACGCCATCG GCCTGGAGAA TTTCGGGCGC TACCGCTTCA ACGCCCATCG GGGCTGGAAC GACACGGTGC TGACCGCGCT CGCCGCGGAG ATCGATGGGC TGGCGATCCA TAACGGCTAC GCGCCCCTGC TGCCGGGTCC GGAGGGCGGC AGCGCCGCAT CGGTCTACCG GGCCATGCTG GCAGCGCCGG CCAACATGGC GGCGAACCTC GTCACGACGA TGCGGCAGCT GCACTCCGTG CAGGCCGGGC GCCGGCTCAC GCTGGCCGTC ACCGAGTGGG GACCGCTCTT CGCCGTCGAT CCGGCCAACC GGTATTTCGA CCACGTGAAG ACCCTGGGGT CCGGCCTGTA CGTGGCGCGG GTCCTCAACG TCCTGCTGCG GACGCCCGGC GTCGCGGAAG CCGAGTTCTT CAAGCTCAGT GACCTGCTGA ATGCGGGCTG GATCGGCCGC AAGGTCGGCG GCGGCTACGC GGCGACGCCC GCCCTCGAGG TGCTGCGCCT CTACGCTTCG AACCTGTCGG GCCGCCTGAT CGGCACCCGC GTGGACGGCC CGACATTCTC CGGCGGCCCG ATCGGCTTCA TCGACAGGGT CGACGCTGCC TCCACGGTCG AGGCCGTGGC CTCGCTCACC GAGTCGGGCG AACTCGCCAT CCTGCTCTCG AACGCGAGCC TCGAGGCGCC CGCGGAGATC GAGCTCGACC TCGACCGGTC GCGCGCAGGA TCGATGGAGA TCCTGAGCGG GCCCGCCCCC GACGCAACCC GCGGCACCGG CATGATTTCG GTTCCAGGCC TGTCCTTCGC GCAGACCGCC GATTTCGGCG CCCCGCGCCC GCACGGCCGG GACGAGATCA CGCTCGCGAC CCGGCCCGTC GCGCCGGGCG CGCGCCTCCG CCTCGTCCTG CCGCCCGTAT CGGTCGCGGC GCTTCGCTTG GGGGCGGCCC GATGA
|
Protein sequence | MRHVRILAAG GALCAALLGL FLVTAQPALG LRLANADFEQ EGSPPPGWSQ DGQTADKGEV RQVTVAGGQG RTLALSPNRR NRGGDKPLGL GQVIEAADLS GRPLTLRARL GAEGGAAAVV GVAFLDGSGA DVGARLVLRA AAAPPLSVQS IRSDEAVPAA ARQAIVFLVA EGQAGTAYFD DIELVSEVTP AVAPARGRPV AARVSLVPGE DLGPVRRHLF GANVEWIRNA QGLWNPATRS LDADMLALAK AAGVSVLRFP GGGWSDSYDW RNGVGPQASR PRSQHAPGEP EESPNVIGTD EIIEAARRID ADLLITLNLG SGTPALAAEW ARYVRARIGP DARPRVTWEL GNELYMEQDI SRGQTDPQTY VQRARATIAA VRAVDPAARF YAIGLENFGR YRFNAHRGWN DTVLTALAAE IDGLAIHNGY APLLPGPEGG SAASVYRAML AAPANMAANL VTTMRQLHSV QAGRRLTLAV TEWGPLFAVD PANRYFDHVK TLGSGLYVAR VLNVLLRTPG VAEAEFFKLS DLLNAGWIGR KVGGGYAATP ALEVLRLYAS NLSGRLIGTR VDGPTFSGGP IGFIDRVDAA STVEAVASLT ESGELAILLS NASLEAPAEI ELDLDRSRAG SMEILSGPAP DATRGTGMIS VPGLSFAQTA DFGAPRPHGR DEITLATRPV APGARLRLVL PPVSVAALRL GAAR
|
| |