Gene M446_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3935 
Symbol 
ID6130254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4382609 
End bp4383709 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content77% 
IMG OID641644093 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001770735 
Protein GI170742080 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.763325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0163627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC CTGCCCCGCC CGCCGCGACC GGGCCCCTCG CGGGGCTGCG CCTCGTCGAG 
TTCGCCGGGA TCGGCCCCGG CCCCTTCGCG GCCATGCTGC TCGCCGATCT CGGCGCCGAC
ATCCTGCGCG TCGACCGGCC CGGCGGGGCC GATCCCTATT CCCGCCACGT GCTGACCCGC
TCGCGCCGCA CCGTCACGGC GGACCTCAAG GCGCCGGGCG ACCGCGCCCG CGTGCTCGCC
TGCCTCGACG AGGCCGACGC GCTGATCGAG GGCTTTCGCC CCGGCGTGAT GGAGCGGCTC
GGCCTCGGGC CGGAGGTGGT CCTCGCCCGC AACCCGCGGC TCGTCTACGG GCGGATGACC
GGCTGGGGCC AGGAGGGGCC GCTCGCGGCG CGCGCCGGGC ACGACCTCAC CTACATCGCG
GTGACCGGGG CCCTCGCGGC GATCGGGCCG GAGAGCCACC CGGTGCCGCC CCTCAACCTC
GTCGGCGATT TCGGCGGCGG CGCGCTCTAC CTCGCGATGG GGATCCTGGC CGGGATCCTC
TCGGCCCGGC GGACGGGGCA CGGGCAGGTG GTGGATTGCG CCATCTGCGA CGGCGCCGCC
TCGCTGATGG CGATGGCGAG CGACTTCGCG GCCCAGGGCC TCGGCACGCA GGCGCGGGAA
GCCAACCTGC TCGACGGCGG CACGGCCTAT TACCGGACCT ACGCCTGCGC GGATGGCCGC
TTCGTCGCCC TCGCGGCGCT GGAGCCGCAC TTCTTCGCCG AGTTCCGGCG CCGGGTCGGG
CTGGAGGACG ATCCCGCCTT CGACGACCGC GACGGCGCGG CCCTGCACCG GCGGCTCGAG
GCCCTGTTCC TGACCCGGAC CCGCGACGCG TGGTGCCGCC TGCTGGAGGA CACCGATTCC
TGCCTCGCCC CCGTCCTCAC CCTGAGCGAG GCGCCGTCCC ACCCGCACCT CGCGGCCCGC
GGGACCTACC TGGAGGTCGA CGGGGTGATG CAGCCGGCCC CCGCGCCGCG CTTCTCGCGC
AGCCCGGCGG CGATCCGCCG GGACCTGCCC GCGACCAGCC TGGAAGCGGT GGCGGCGGCG
TGGCGCGGCG CGGCACCCTG A
 
Protein sequence
MTPPAPPAAT GPLAGLRLVE FAGIGPGPFA AMLLADLGAD ILRVDRPGGA DPYSRHVLTR 
SRRTVTADLK APGDRARVLA CLDEADALIE GFRPGVMERL GLGPEVVLAR NPRLVYGRMT
GWGQEGPLAA RAGHDLTYIA VTGALAAIGP ESHPVPPLNL VGDFGGGALY LAMGILAGIL
SARRTGHGQV VDCAICDGAA SLMAMASDFA AQGLGTQARE ANLLDGGTAY YRTYACADGR
FVALAALEPH FFAEFRRRVG LEDDPAFDDR DGAALHRRLE ALFLTRTRDA WCRLLEDTDS
CLAPVLTLSE APSHPHLAAR GTYLEVDGVM QPAPAPRFSR SPAAIRRDLP ATSLEAVAAA
WRGAAP