| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3927 |
|---|
| Symbol | |
|---|
| ID | 6134899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4375378 |
|---|
| End bp | 4376979 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641644085 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001770727 |
|---|
| Protein GI | 170742072 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.180708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0370442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA GATCGCTGCT GAAGGCAATG GCCGGCGCGG GCGCGCTCGC CGCCGGACCC
TCCTTCCCGG CCCCGGCCCT CGCCCAGGGC GCGGCCAAGA CCCTGCGCTT CGTCCCGCAG
GCGAACCTCG CCAATTTCGA CCCGATCTGG GGGACCCAGT ACGTGGTGCG CAACGCCGCG
GCCCTGGTCT GGGACACGCT CTACGGGGTC GACGCGCAGC TGCGGCCCCA GCGCCAGATG
GTCGAATCCG AGACCGTCTC GTCGGACGGG CTGACCTGGA CCTTCACCCT GCGGCCGGGC
TTGAAGTTCC ACGACGGCGA GCCGGTGCGG GCGCGGGACG CGGTGGCGAG CCTCGTGCGC
TGGTCGGCCC GCGACCCGAT GGGGCTGATG ATCCGGGCGA TCCAGGCGGA GCTCTCGGCG
GTCGACGACC GCAGCTTCCG CTGGGTGCTG ACCAAGCCCT ACCCGAAGAT GCTCCTGGCG
CTCGCCAAGA ACAACGCGCC CTGCTCCTTC GTGATGCCCG AGCGCATCGC CCAGACCGAC
CCGTTCAAGC AGATCACCGA GTATGTCGGC TCCGGGCCGA TGCGCTTCGC CCGCGACGAG
TGGGTGCCGG GGGCGCGGGC GGTGTTCACG CGCTTCGCCG ATTACGTCCC GCGCCAGGAG
CCGGCCTCCT GGCTCGCGGG CGGCAAGCAG ATCGCCTTCG ACCGGGTCGA GTGGATCATC
ATGCCGGACC CGGCCAGCGC CTCGGCGGCC CTGCAGAACG GCGAGGTCGA TTGGTGGGAG
AACCCGATCG CCGACCTCGT CCCGCTGCTC AAGAAGAACC GCAACATCCA GGTCGACATC
GCCGACCCGC TCGGCAACGT CGGCTCGTTC CGGATGAACA CGCTGCACCC GCCCTTCAAC
AACCAGCTGG TGCGCCGCGC GGTCCTGATG GCGATGAACC AGGAGGACTA CATGCGGGCG
ATCGTCGGCG ACGACGACGC GCTGTGGAAG CCGCTGCCCG GCTACTTCAC GCCCGGGACG
CCGCTCTACA ACGAGGAGGG CGGCGAGGTG GTCAAGCCCG GCGGCGACCT CGCGGCGGCC
AGGAAGCTCC TGGCCGAGAG CGGCTACAAG GGCGAGCCGG TGACCTGCGT GGTGGCGCAG
GACCAGCCGA TCACCAAGGC GCAGGGCGAC GTCACCGCCG ACCTGCTCAA GAAGCTCGGC
ATGAACGTCG ACTTCGTGGC GACCGACTGG GGCACCGTCG GCGCCCGCCG CGCCTCCAAG
GCGCCGCCCA AGGACGGCGG CTGGAGCATG TTCCACACCT GGCATGCCGG GGCGGATTGC
CTGAGCCCGG TCGGCTACAC GGCGATCCGG GCCAACGGCG ACAAGGCGTG GTTCGGCTGG
CCCGACAGCC CGCCGGTGGA GGCCGCGATC ACCGGCTGGT TCGAGGCGGC GACGCCGGAG
GACGAGAAGG CCGCCATGCG CCGCCTCAAC AAGGCCGCCC TCGACTACGT GGTCTACGTG
CCGACCGGCT TCTTCCTCAC CTACCAGGCG TGGCGGACAT CGCTGAGCGG CGTCACCAAG
GGCCCCCTGC CCTTCTTCTG GGGCGTGTCG AAATCGGCGT GA
|
|---|
| Protein sequence | MDRRSLLKAM AGAGALAAGP SFPAPALAQG AAKTLRFVPQ ANLANFDPIW GTQYVVRNAA
ALVWDTLYGV DAQLRPQRQM VESETVSSDG LTWTFTLRPG LKFHDGEPVR ARDAVASLVR
WSARDPMGLM IRAIQAELSA VDDRSFRWVL TKPYPKMLLA LAKNNAPCSF VMPERIAQTD
PFKQITEYVG SGPMRFARDE WVPGARAVFT RFADYVPRQE PASWLAGGKQ IAFDRVEWII
MPDPASASAA LQNGEVDWWE NPIADLVPLL KKNRNIQVDI ADPLGNVGSF RMNTLHPPFN
NQLVRRAVLM AMNQEDYMRA IVGDDDALWK PLPGYFTPGT PLYNEEGGEV VKPGGDLAAA
RKLLAESGYK GEPVTCVVAQ DQPITKAQGD VTADLLKKLG MNVDFVATDW GTVGARRASK
APPKDGGWSM FHTWHAGADC LSPVGYTAIR ANGDKAWFGW PDSPPVEAAI TGWFEAATPE
DEKAAMRRLN KAALDYVVYV PTGFFLTYQA WRTSLSGVTK GPLPFFWGVS KSA
|
|---|
| |