Gene M446_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3926 
Symbol 
ID6134898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4374420 
End bp4375361 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content69% 
IMG OID641644084 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770726 
Protein GI170742071 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.18831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0133436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCT ATGCGGGACG GCGGGTCCTG GCGACGATCC CGGTGATGGC CGTCGTCGCC 
CTGTTCGTGT TCAGCCTGCT CTACATCGCG CCCGGCGACC CGGCGGCGAT CATCGCCGGG
GACCAGGCGA CGCCCGACGA CGTCGCCCGG ATCCGGGCGA CCCTCGGGCT CGACCGGCCC
TTCCTGGTGC GCTTCGGCGA GTGGGCCTGG CAGATCCTGC AGGGGGACCT CGGCACCTCG
ATCTTCACCG CCCTGCCGGT GACGGCGCTG ATCCGCCAGC GCATCGAGCC GACCCTGTCG
CTGATGGTCG TGACGCTGGT CCTGTCGATC GCCGTCGCGG TGCCGCTCGG CGTCGCGGCG
GCCTGGAAGG CCGGGAGCCT GATCGACCGG CTGGTGATGA CGCTGGCGGT GTTCGGCTTC
TCGGTGCCGG TCTTCGTGAT CTCCTACCTG CTCGCCTACG TCTTCGCCCT CGAACTCGAA
TGGCTGCCGG TCCAGGGCTA CACGCCGCTC TCGGCCGGGT TCTGGCCCTG GCTGCAGAAC
CTGATCCTGC CGGCGGTCGC CCTCGGCTCG GTCTACATCG CGCTGATCGC CCGGATCGCC
CGCGCGACGA TGCTCGAAGT GCTGGCGCAG GACTACATCA AGACCGCGAC CGCCAAGGGC
CTGGGCCGGC GCGCCATCCT GTTCGTGCAC GCGCTCAAGA ACGCCTCGGT GCCGATCGTC
ACGGTGATCG GCCTCGGCAT CGCGCTCCTG ATCGGCGGGG CCGTCGTCAC CGAGAGCGTC
TTCGTCATCC CGGGGCTCGG GCGGCTCACC GTCGACGCCA TCCTGCGCCG CGACTACCCG
GTGATCCAGG GCGTCGTGCT GCTGTTCAGC TTCTGCTACG TGCTGGTCAA TCTCGGCATC
GACCTCGTCT ACGTGCTGCT CGACCCGAGG ATCCGCTATT GA
 
Protein sequence
MLAYAGRRVL ATIPVMAVVA LFVFSLLYIA PGDPAAIIAG DQATPDDVAR IRATLGLDRP 
FLVRFGEWAW QILQGDLGTS IFTALPVTAL IRQRIEPTLS LMVVTLVLSI AVAVPLGVAA
AWKAGSLIDR LVMTLAVFGF SVPVFVISYL LAYVFALELE WLPVQGYTPL SAGFWPWLQN
LILPAVALGS VYIALIARIA RATMLEVLAQ DYIKTATAKG LGRRAILFVH ALKNASVPIV
TVIGLGIALL IGGAVVTESV FVIPGLGRLT VDAILRRDYP VIQGVVLLFS FCYVLVNLGI
DLVYVLLDPR IRY