Gene M446_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3925 
Symbol 
ID6134897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4373512 
End bp4374423 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content74% 
IMG OID641644083 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770725 
Protein GI170742070 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0134346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGA CCGTCGACCC CTCCGGCCCG GTCGCGGCGG CGCCGGACCT GCCCGACCTC 
TTCCCGCCGG TGCGCCGCCG GGGCGGCCTC CCGGGCCTGA TCCGGCGCCA CCCGGCGGTG
GCGGTCGGGG CGGCGATCCT GCTGCTGATG CTGGCCTGCG CGGTCCTGGC GCCGTACCTG
TTCACCGTCG ACCCGACCGC CCTGTCGCCG TCGCGGCGCA CGCGGCTGCC CTCGGCGCAG
TACTGGTTCG GCACCGACAT GCTCGGTCGG GACATCTACT CGCGGGTGAT CTACGGGGCC
CGGGTCTCGC TCCTCGTCGG CTTCGCGGTG GCGGCGCTCG CCTCCGGGAT CGGGCTCGCG
ATCGGCCTCG TCTCGGGCTT CCTGCGGTCG CTCGACGGAA TCGTCATGCG GGTGATGGAC
GGGGTGATGG CGATCCCGCC GATCCTGCTC GCGGTCGCCC TGATGGCGCT CACCCGCGGC
TCGGTCGGGA ACGTGATCGC GGCGATCACC GTGGCGGAGA TCCCGCGCGT CGCGCGCCTC
GTGCGCGGGG TGGTCCTGTC CCTGCGCGAG CAGCCCTACG TGGATGCCGC GGTGGCGAGC
GGCAGCACCG TGCCGGCGAT CATCGGGCGC CACATCCTGC CGGGCACCCT GGCGCCGCTC
ACCGTGCAGG CGACCTACAT CTGCGCCTCG GCGATGATCA CCGAGGCGAT CCTCTCCTTC
ATCGGCGCCG GCACCCCGCC GACCACGCCC TCCTGGGGCA ACATCATGGC GGAGGGCCGC
GCCCTCTGGC AGGTGAAGCC GACGATCGTG TTCTTCCCCG CCCTGTTCCT GTCGCTCACC
GTGCTCGCCG TGAACCTCGT CGGCGACGGG CTGCGCGACG CCCTCGACCC GCGCATGGCC
AAGCGGCTGT GA
 
Protein sequence
MSATVDPSGP VAAAPDLPDL FPPVRRRGGL PGLIRRHPAV AVGAAILLLM LACAVLAPYL 
FTVDPTALSP SRRTRLPSAQ YWFGTDMLGR DIYSRVIYGA RVSLLVGFAV AALASGIGLA
IGLVSGFLRS LDGIVMRVMD GVMAIPPILL AVALMALTRG SVGNVIAAIT VAEIPRVARL
VRGVVLSLRE QPYVDAAVAS GSTVPAIIGR HILPGTLAPL TVQATYICAS AMITEAILSF
IGAGTPPTTP SWGNIMAEGR ALWQVKPTIV FFPALFLSLT VLAVNLVGDG LRDALDPRMA
KRL