| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3902 |
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| Symbol | |
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| ID | 6135395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 4349357 |
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| End bp | 4352329 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641644062 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001770704 |
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| Protein GI | 170742049 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTTG AGAATGACGA GGCGCGCGAC GCCTGCGACG ATGGGACGGG GACGGAACAG
GGCAATGCTG CCCTCCTCCC GGCCGTCCTG GAGACCATGG ATCAGGGTCT CATGATGATC
GACGCCGAGG GTGTCGTGCG CGTCTGCAAC GGCCGCGTCA TCGAGATGCT CGATCTGCCT
CCCGAGATGA TGCGGGCGCA GCCCAGCTTC GACCAGGTGC GCCAGTACCA GCTCGGTCGG
GATGAGTTCC GCCGCTCTCC GAAGGAATTC CGCCAGTGGG TCGCGGATAC CGGATTGAGG
CCGCGCCACC ACGTCTACGA GCGGGAGCGA CCCAACGGCC GCATCCTGGA AATCCGCACC
GTGCCCCTCC CCGGGGGCGG CGCCGTCCGC ACCTACACCG ACATCACCGA CCGCAAGCGC
GCCGAGCAGC AGGTCGCCGC CAGCGAGGCC CGCTACCGCG CCCTCGCCGA CGGCCTGCCG
CAGATGGTCT GGGTCATGCG CGCCAGCGAT GGCGAGTTGC TCTACCGCAA CGCGCGCTTC
GCGCACTACT ACGGCGAGAT CGGCACCGCG CGGGGGGAGC GCGTGGAGCG CAGCCACCCC
GACGACGCCG CGCGGGTCGC GGCGGAGTGG GCGCGGTGCC GGGCCGAGGG CTGCCCCTTC
GAGATCGAGG TGCGCCTGCG CCGCCACGAC GGCGTCCATC GCTGGCACAA GCTCGTCAAG
ATCCCGGTGC GCCACGCGGG CGAGACGGTG GAGTTCCTCG GCACCGCCCT CGACATCGAG
GAGATCGTCG CTGGTCGCGA GGCCCTGCGG GTCACGACCG ACCGGCTGCG CCTCGCCCAG
GAGGCGGCCG GTGCTGGCCT GTTCGACTGG AGCCTGATCG ACGGCAGCGC CCTGCTCTCG
CCGGAGACGC TGCGGCTGTT CAACCTGCCC GAGGACCGCG CGACGCGGGT CACGCAGGCG
GAGTGGGCTG CCGCCATGCA CCCGGACGAC CTGCCGGTGC TGGCGGCCGA GACCCGGCGG
GCGGTCGCCA CCGGCACGAC CCTGCGAGTC GAGTTCCGAA TTCCCCTGCC GGACGGGTCC
GATCGCTGGA TCATGGGCAC GGGCCGGGTG ATGGCGGACG GGGATGGGCG CGCCGTCCGC
GTGGTCGGCA TCAGCATCGA CGTCACGGAC CGCAAGAGGG CCGAGCAGGC GCGGCAGGCC
AGCGAGGCCG CGCTGCGGGT CAGCGAGGAG CGCCTCGCCC TCGCCCTGGA GAGCGGCAGC
GACGGCCTGT GGGACTGCGA CCTCACCACC GGCACGTCCT GGGTCTCCGA CCAGTGGCTG
ACGATGCTCG GGTACCGGAA GGGTGAGCTC GACGCGGGCT ACGAGACGTG GCTGCGCCTG
CTGCACCCGG ACGACAGGGA GGCGGTGCTG GCGCGCGTGC GCGACCACCT GGAGGGCCGC
ACACCGAGCT ACGAGTGCGA GCAGCGCATG CGCCGCAAGG ACGGCGGCTG GGCCTGGATC
CTGGAACGCG GCAAGGTCGT CTCGCGGGCG CCGGACGGCA CCGCCCGGAG GGTGGTGGGC
ACCCACATCG ACATCACCGC GCGCAAGGAG GCCGAGGCGC GGGTCACCCA CATGGCCCGC
CACGACACCC TCACGGACCT GCCCAACCGG GCGCTCTTCC GCGAGCGCCT GGAGCAGCGG
CTGGCCGAGA TCCGCCGCCA CGGCGGGCAC TGCGTGCTGC TGGCGCTCGA CCTCGACGCC
TTCAAGGCCG TGAACGACAG CCTCGGTCAC CTCGCGGGCG ACGCCCTGCT GCGCGAGATC
GCCCGGCGGT TTCGGTCGGT GCTGCGCGCG GAGGACACCG TCGCCCGGCT CGGCGGCGAC
GAGTTCGCGA TCCTTCTCGG CGGCACGCCC CGCCTGGAGA GCGTCATGGA CTTCGCCGAG
CGGCTGGTCG CGTCCGTGCG CGAGCCGGTC ACGCTGGAGG GGCAGCAGGT CGGCGTCGGC
GTGAGCATCG GCATCGCGAT CGGCCCCGAG CACGGGGAGG ATGCCGACAC GCTGTTCCGG
CACGCCGACC GCGCGCTCTA CCGCGCGAAG AGCGACGGGC GGAACACCTT CCGGTTCTTC
GAGCCCGCGA TGGACAGGGC GGCCGAGGAG CGCCGCCGGC TCGAACTCGA CCTGCAGCTC
GCCCTGCGGC GCGGCGAGTT CGTGCTGCAC TACCAGCCGG TCCTCGACGT CGCCTCCCGG
GCGATCGTCG CGGTCGAGGC GCTGGTGCGC TGGAACCACC CGACCCGTGG CCAGCTCGGC
CCGGGCGTGT TCATCCCCCT CGCGGAGGAG ACGGGTCTGA TCGTGGCGCT CGGCGAGTGG
GTGCTGCGGA CCGCCACCCG GGACGCGCGG CACCTGCCGG AGCACGTGCG GGTGGCGGTC
AACATCTCCG CAGTCCAGGT CCGGCACGCC AGCCTCGGGC AGACCGTGCG GGCGGCCCTC
GACGCCGCCG CGCTCTCTCC GGACCGACTG GAGCTCGAGA TCACCGAGAG CGTGCTGATG
GGCGACAGCA GCCTGGTGCG GGACGCGCTG TCCGGGCTGC GCGAGCTCGG GACCCATCTG
GCGCTGGACG ATTTCGGGAC GGGGTACTCG TCCCTGAGCT ACTTGCGGCA GTACCCGTTC
GATCGGCTCA AGGTGGACCG CTCGTTCATC GCCTCGATCC CGGACCAGGG GACGGTGACG
ATCCTGCGGG CGATCGTCGG CCTGGGCACG GGGCTCGGCA TGACCGTGAC GGCCGAGGGT
GTGGAGACGC CCGCGCAGTT CGCCTTCGTG GAGGCCGAGG GCTGCGCGCA GGTGCAGGGC
TACCTGACCG GCAAGCCGCA GCCCCTCCCT GACCTGCTGG CGACCCTTGA GGGACGCAAC
GACCAGCCTC CTCTGCAGGA CACCTTTCCG CCCTCGCCGA CACTGAAACC TCGCTCGCCG
AAAGCCGTTG AGCCACTGAC CCGCAGGCCG TGA
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| Protein sequence | MLLENDEARD ACDDGTGTEQ GNAALLPAVL ETMDQGLMMI DAEGVVRVCN GRVIEMLDLP
PEMMRAQPSF DQVRQYQLGR DEFRRSPKEF RQWVADTGLR PRHHVYERER PNGRILEIRT
VPLPGGGAVR TYTDITDRKR AEQQVAASEA RYRALADGLP QMVWVMRASD GELLYRNARF
AHYYGEIGTA RGERVERSHP DDAARVAAEW ARCRAEGCPF EIEVRLRRHD GVHRWHKLVK
IPVRHAGETV EFLGTALDIE EIVAGREALR VTTDRLRLAQ EAAGAGLFDW SLIDGSALLS
PETLRLFNLP EDRATRVTQA EWAAAMHPDD LPVLAAETRR AVATGTTLRV EFRIPLPDGS
DRWIMGTGRV MADGDGRAVR VVGISIDVTD RKRAEQARQA SEAALRVSEE RLALALESGS
DGLWDCDLTT GTSWVSDQWL TMLGYRKGEL DAGYETWLRL LHPDDREAVL ARVRDHLEGR
TPSYECEQRM RRKDGGWAWI LERGKVVSRA PDGTARRVVG THIDITARKE AEARVTHMAR
HDTLTDLPNR ALFRERLEQR LAEIRRHGGH CVLLALDLDA FKAVNDSLGH LAGDALLREI
ARRFRSVLRA EDTVARLGGD EFAILLGGTP RLESVMDFAE RLVASVREPV TLEGQQVGVG
VSIGIAIGPE HGEDADTLFR HADRALYRAK SDGRNTFRFF EPAMDRAAEE RRRLELDLQL
ALRRGEFVLH YQPVLDVASR AIVAVEALVR WNHPTRGQLG PGVFIPLAEE TGLIVALGEW
VLRTATRDAR HLPEHVRVAV NISAVQVRHA SLGQTVRAAL DAAALSPDRL ELEITESVLM
GDSSLVRDAL SGLRELGTHL ALDDFGTGYS SLSYLRQYPF DRLKVDRSFI ASIPDQGTVT
ILRAIVGLGT GLGMTVTAEG VETPAQFAFV EAEGCAQVQG YLTGKPQPLP DLLATLEGRN
DQPPLQDTFP PSPTLKPRSP KAVEPLTRRP
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