Gene M446_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3891 
Symbol 
ID6133599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4336960 
End bp4338180 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID641644052 
Productextracellular ligand-binding receptor 
Protein accessionYP_001770694 
Protein GI170742039 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG CAGGACTGGT CGCCAGCGCG CTGTGCCTGG CGTTGAACCC GCTCGCAAGC 
GCACCGGCCC TCGCCGCGGA TTTGACAGAC GGCAAGGTCG TGATTGGCGT CCTTACCGAC
ATGTCCGGTC CGTATGCCGA CGTGGGCGGG AAGGGCTCAG TCGAGGCGAC CCGCATGGCT
GTCGAAGACT TCGGCGGCAA GGTTCTCGGC AGGCCTATCG AGATCGTATC GGCCGATCAT
CAGCACAAGG CGGACACCGG CGCGGGCATC GCTCGCAACT GGTTCGACCG CGAGGGGGTT
GATGCCGTCG TCGACCTCAA CAACACGTCC GTGGCACTCG CCGTCAACAA TTTGGCCGTA
GAACGAAATC GGCTGACCCT GATGACGGGC ACCGCCTCGT TGATCATGAC GAACGAGAAT
TGCACGCCCA ATTCGATCCA CTACGTTTAC GACACGTATT CGGCAGCGCA TGGCGTCGTG
AAGTCGATGA GCGAACTCGG GAAGAAGAAG TGGTTCGTTC TCGCCGCCGA CTACGCCTAC
GGCAAAGGGG TGGCCGGCGC GCTCAAGGAG TTTACCGAAG AGGCGGGCGC GAAGCTCGTC
GGCACAGTCT TTCACCCGCT CAATTCCCCT GATTTCTCGT CGTTTCTGCT GCAGGCCCAG
GCCTCGAAGG CGGACGTGAT CGCGCTGGGC AATGCCAGCT CGGACACGGT GAACTCCATC
AAAGCAGCGC GCGAGTTCGG GCTGACCACG ACTCAAAGCG TGGTGCCGCT CCTGATGTAC
ATCCAAGACG TCCATTCGCT CGGCCTGCAG GAGGCGCAGA ATCTCACCTT CGTCACCGGG
TTCTATTGGG ACCGCACGCC AGAGACGCGC GCTTGGTCGA AACGCTTCTT CGAGCGCACG
AAGCAGATGC CGTCTCAGAT TCAGGCGGGC GCGTATTCCG CGGTCACCAA CTACCTGAAA
GCGGTCGAGG CCGCCGGCAC GGATGCAGGC AAGGCCGTCG CCGCCAAGAT GAAGGAGCTT
CCGATCGCGG ACATGTTCAC GGAGAGCGGC AAGGTCCGCG CCGACGGGCG CATGGTGCAC
GACATGTACC TGGTCCAGGT GAAGAAGCCG GGCGAGTCCA AGGCTCCGTG GGACTACTAC
AAGGTGCTGG CCACGATTCC GGGCGACGAA GCCTTCCAGC CCCTCTCCAA GAGCAGGTGC
CCGCTCGTGA CGAAGCCGTA A
 
Protein sequence
MKTAGLVASA LCLALNPLAS APALAADLTD GKVVIGVLTD MSGPYADVGG KGSVEATRMA 
VEDFGGKVLG RPIEIVSADH QHKADTGAGI ARNWFDREGV DAVVDLNNTS VALAVNNLAV
ERNRLTLMTG TASLIMTNEN CTPNSIHYVY DTYSAAHGVV KSMSELGKKK WFVLAADYAY
GKGVAGALKE FTEEAGAKLV GTVFHPLNSP DFSSFLLQAQ ASKADVIALG NASSDTVNSI
KAAREFGLTT TQSVVPLLMY IQDVHSLGLQ EAQNLTFVTG FYWDRTPETR AWSKRFFERT
KQMPSQIQAG AYSAVTNYLK AVEAAGTDAG KAVAAKMKEL PIADMFTESG KVRADGRMVH
DMYLVQVKKP GESKAPWDYY KVLATIPGDE AFQPLSKSRC PLVTKP