Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3888 |
Symbol | |
ID | 6133596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4333333 |
End bp | 4334616 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641644050 |
Product | integrase catalytic region |
Protein accession | YP_001770692 |
Protein GI | 170742037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCAGCC TCGGGGAACT CATGACGATC CTGGACCTCC ACCGGCAGGG CCTCTCGGTC ACCGCCATCG CCCGCCAGCT CGGCCTCGAC CGCAAGACCG TCGCCAAGTA CATCGCCCGC GGCCTCGAGC CGCCCGTCTA CGGACCGCGA TCCCCCCGCG CGCGGGCCAC CGACGCCTTC CTGCCCTACC TGCGCGAGCG CCTGGCCGCC TACCCGCAGC TTACGGCCGT CCGTCTCTGG CGCGAGTTGA AGGAGCGCGG CTTCGCAGGG GCCTACACCG CCGTGAAGCG AGCCGTGGCC CTGCTTCGCC CCTCAGCTCC TCTGCCTATC GAGCGCCGCT TCGAGACCCC GCCGGGCGAG CAGGCCCAGG TCGACCTCGC CCGCTTCGAG GTCGTCTTCG CCGACGAGCC GGGCGTGACC CGCATCGTCT GGCTGTTCGC GATGGTGCTG GGCCACTCGC GCTATCTCTG GGCCCGCTTC GTCGTCCACC AGGATCTGCA GACGGTCCTG CGCTGCCACA TCGCCGCCTT CCAGGCCCTT GGAGGCGCCC CGCGCGAGAT CCTCTACGAC CGCATGAAGA CCGCCGTGAT CGGCGAGGAT CCCGACGGCT TGGTCATCTA TAACCGCAGC CTTCTCGATC TCGCGCGCCA CTACGGGTTC CTGCCGCGCG CCTGCCGTCC CTACCGGGCC AAGACCAAGG GCAAGGTCGA GCGCCCGTTC CGCTACCTGC GCGAGGACTT CTTCCTCGCC CGCTCGTTCC GCAACCTCGA CGACCTGAAC GACCAGCTGC GGCACTGGCT CGACACCGTG GCCAACGCCC GCCGGCACGC CACGACCAAG CGGATCGTCG CCGACGCCTT CGCGGAGGAG CGCAGCCAGC TGCGGGCGCT GCCGCCCGTG CCCTACGAAG CCGTGCTCAG CCTGGAGCGG CGCGTCACCC ACGAGGGCTT CGTCTCGGTG GCGGGCAATC TCTACAGCGT GCCCGACACC ACCCGCCGCC GCGCCCTGGA GGTGCACGTG CTGGCCGATC AGATCCGCAT CTACGAGGCG GGTGAGCTCG TTGCCTGCCA CCTGCCCCTG GAAGGGCGTG GGCTGACGCA GGTCGATCCA GCCCATCGGC GGCCGCGATC TCCCCCGCCC GAGCCACGAG ACCCTGCCGA GCCGGTGGTC GTCAGGCGCG CCGGCGACCA GGTCGCGCGT CGCCCGCTGG CCATCTACGA CGCCGTAGCC CGCCAACTCG CGGGAGCCGG CGTGCCCAGG ACCGACCGGG GAGACGCGGC ATGA
|
Protein sequence | MVSLGELMTI LDLHRQGLSV TAIARQLGLD RKTVAKYIAR GLEPPVYGPR SPRARATDAF LPYLRERLAA YPQLTAVRLW RELKERGFAG AYTAVKRAVA LLRPSAPLPI ERRFETPPGE QAQVDLARFE VVFADEPGVT RIVWLFAMVL GHSRYLWARF VVHQDLQTVL RCHIAAFQAL GGAPREILYD RMKTAVIGED PDGLVIYNRS LLDLARHYGF LPRACRPYRA KTKGKVERPF RYLREDFFLA RSFRNLDDLN DQLRHWLDTV ANARRHATTK RIVADAFAEE RSQLRALPPV PYEAVLSLER RVTHEGFVSV AGNLYSVPDT TRRRALEVHV LADQIRIYEA GELVACHLPL EGRGLTQVDP AHRRPRSPPP EPRDPAEPVV VRRAGDQVAR RPLAIYDAVA RQLAGAGVPR TDRGDAA
|
| |