Gene M446_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3865 
Symbol 
ID6134242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4312921 
End bp4313772 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID641644030 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770672 
Protein GI170742017 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.783769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCCG CTCCGCATTC CCTGCGCGCA CGCTTGGTGA CGGCGGCCCT GCTGCTGCCG 
TTCGTGCTCT TCGTCGCCCT GGCCTTCGCG CTGCCGATGC TGAGGCTGAT CGAACTCTCG
CTCTCCTCGC CGGAAGGCGC CTTCGCGTCC TACATCGAGA TCGCGAGCAG CTCCGTCTAC
CGGGCGGTGT TCGCCAACAC GGTGGTGCTG GCGCTGTCGG TGGCGGCCCT GACGACGCTC
CTCGCCTATC CGACCGCCTA CATGGTCTCG GAACTGAGGG GCTGGAAGCG GAGCCTCGCC
CTCTGGTGCG TGCTGTTCCC GCTCTGGATC AGCGTCCTCG TCCGGACCTT CTCGTGGATC
CTGCTCCTAG AGCGGAACGG ACCGGTCAAC CGGCTCCTGC TCGCCTCCGG CCTCGTCGAC
ACGCCGGTGA GCCTGCTGTT CAACTCGGCC GGCGTGCATA TCGGCATGGT CCAGGTGCTC
CTGCCCTATG CGCTGCTGCC GATCCTGACG TCGATGCGGA CCTTCGACGG GCGGCTCCTG
CTCGCCAGCG ACGCGCTCGG CGCCCGCCCG ATCACGACCT TCTGGCGCGT CTACCTGCCC
CTGACGCTTC CGGGCGTGAT GGCGGGCTTC ACGCTCGTCT TCCTGCTCGG CCTCGGCTTC
TACATCACGC CCGCGATCCT CGGGGGGCCG GGCAACATGA CCATCGCGAT GCTGATCGAC
CAGTTCGTCA CCGAGCGGCT GGTCTGGCCG CTCGCGGCGG CGGCCTCGGT CTGGCTCCTG
GCCGTGATCG TGCTGCTGAT GGCCGTGGCG AGCCGGTTCG TCGGCCTCGT CAACGTGGTG
GCCGCCCGAT GA
 
Protein sequence
MRSAPHSLRA RLVTAALLLP FVLFVALAFA LPMLRLIELS LSSPEGAFAS YIEIASSSVY 
RAVFANTVVL ALSVAALTTL LAYPTAYMVS ELRGWKRSLA LWCVLFPLWI SVLVRTFSWI
LLLERNGPVN RLLLASGLVD TPVSLLFNSA GVHIGMVQVL LPYALLPILT SMRTFDGRLL
LASDALGARP ITTFWRVYLP LTLPGVMAGF TLVFLLGLGF YITPAILGGP GNMTIAMLID
QFVTERLVWP LAAAASVWLL AVIVLLMAVA SRFVGLVNVV AAR