Gene M446_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3863 
Symbol 
ID6134240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4311054 
End bp4312133 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content72% 
IMG OID641644028 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001770670 
Protein GI170742015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCA AGGCGGGACG CCCGGTCGCG TTCGCGGGCA TCGCGAAGCG CTACGGCAGC 
TTCGAGGCGT TGTCCGCCAT CGACATCGCC CTCGAACCCG GCGAGTTCCT GGCACTGCTC
GGGCCGAGCG GATCGGGTAA GACGACACTT CTCAACATCG CGGCCGGCTT CGTCGCCCCG
AGCGCCGGCC GGGTCGTTAT CGCCGGCCAG GACGTGACGC CGCTGCCGCC GCGCAAGCGG
AATATCGGCA TGATGTTCCA GAGCTACGCC CTGTTCCCGC ACCTGAGCGT GTTCGAGAAC
GTCGCCTACG GGCTGCGGGT CCGCAACCGG CCGCGGGCCG AGGTCGCGGA GCGCGTCGAG
GCGGCGCTCG CCATGGTGCA GCTCGACGGA CTGGGCCAGC GGCGGATCCG CGGGCTCTCG
GGCGGCCAGC AGCAGCGCGT CGCCCTGGCT CGGGCGGTCG TGACCGAGCC GGACGTGCTG
CTGATGGACG AGCCGCTCGG CGCGCTCGAT CGGCAGTTGC GCAAGCATGT GCAGCTCGAG
ATCCGCCGCC TCCATCGCGC CCTCGGCTGC ACCACGGTCT TCGTGACCCA CGACCAGGAG
GAGGCGCTGA TGATGGCCGA CCGCGTCGGT GTCATGCGGG CCGGCCGCCT CGAACAGGTC
GGCAGCCCAC GGGACCTCTA CGCCCGCCCA GCCAATGCCT TCGTGGCGGC CTTCCTCGGC
GAATCGAACC TGCTGCGCGG GCGGGTGACG CGGTGCGAGG GCGGCGCGGC CGCGATCGAC
CTGCCGGCCC TGCGCACTAC GCTGCGCGGG CGCGCGGCCC GGCCGTTCCG GGTCGGCGAG
GAGGCGGCGG CGCTGCTGCG GCCCGAGACC CTGTCTTTCG CACCCCACGG CGGTTTCAGG
GGCCGGGTCG AGGAGACGAT CTTCCTCGGC GAGATCTTCG CCGCCCGGGT GGAACTGGCA
CCCGGGCAGT CCGTCTGGGT GCGCACCTTC TCCTCGGGCG ATCAGCCCGC GGAAGGGGCG
CAGACGACAC TCGCGTGCGA TCCGGCCGCG ATCCTGATCC TTCCCGCTGA CCCCACCTGA
 
Protein sequence
MHTKAGRPVA FAGIAKRYGS FEALSAIDIA LEPGEFLALL GPSGSGKTTL LNIAAGFVAP 
SAGRVVIAGQ DVTPLPPRKR NIGMMFQSYA LFPHLSVFEN VAYGLRVRNR PRAEVAERVE
AALAMVQLDG LGQRRIRGLS GGQQQRVALA RAVVTEPDVL LMDEPLGALD RQLRKHVQLE
IRRLHRALGC TTVFVTHDQE EALMMADRVG VMRAGRLEQV GSPRDLYARP ANAFVAAFLG
ESNLLRGRVT RCEGGAAAID LPALRTTLRG RAARPFRVGE EAAALLRPET LSFAPHGGFR
GRVEETIFLG EIFAARVELA PGQSVWVRTF SSGDQPAEGA QTTLACDPAA ILILPADPT