Gene M446_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3853 
Symbol 
ID6131992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4297904 
End bp4298977 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content66% 
IMG OID641644018 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001770660 
Protein GI170742005 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAAGA TCAGCCTGGA GGCGCTCAGC AAGCGGTATG GCGAATTTCG CGCCCTCACA 
GATTTCAGCC TCGAGGTCGC GAGCGGCGAG TTCGTCAGCC TGCTCGGGCC GAGCGGCTCC
GGCAAGACGA CCCTTCTGAA CCTCATCGCC GGTATGACGC GGCCGTCGAG CGGCCGGATC
CTGATCGACG GCCTGGACGT GACGCACGTG CCGCCGAGCA AGCGCAAGCT CGGGATGGTG
TTCCAGAACT ACGCGCTCAT GCCCCACATG ACCGTGTTCG AGAACATCGC CTTCCCGCTT
GAGGTCAGGG GCGTCGGCAA GGCGGAGATC CGGCGGCGGG TCGGCGAAGT GCTCGACCTC
ATCCGGATGC CGCACGTCGC CGAAAGACGG CCGAAGGAAC TCTCGGGTGG GCAGCAGCAA
CGCATCTCGC TTGCCCGCTG CATCGTCTAC AAGCCGGCCC TCATCCTCAT GGACGAGCCG
CTCGGCGCAC TCGACAAGAA ACTGCGGCAG GAGATGCAGA TCGAGATCAG CCGGCTTCAC
CGCGAATCCG GCATCACCAT GCTGTACGTG ACGCACGATC AGGAGGAGGC ACTCACGATG
TCCGATCGGA TCGTTCTCAT GAAGGACGGG CGGGCGGCGC AGTGCGGCAC GGCCGACGAG
CTCTACTTCG AGCCGAACTC CCCCTACGTT GCCGACTTCA TCGGCGAGTC CAACCTGATG
CCGGGACGCA TCGTGTCTCA GCAGGGATCG GATCTCACGC TAAGCCTGGG CGACGTGAGG
ATGACCGCAC CGCGTCCGTC CTTTCCGGTC GAAGTCGGTG AAGAGATCAC GCTCCTCGTC
CGGCCCGAGT TGGCGGCCCT CGCCACCGCA CCGTCGCCGA CCCATCCGCT CGCGGGGGCC
TTGGAGGCGT CTCTCGTCGT CGGAGCCAAC GTCCGACACG TCGTGCGGCT CGCGACCGGG
GCGCGGTTCC TCGTCCAGGA ATTCAACCAC CGCCACCGCG AGAAGCTGGA GATTGGCGTC
GGCGTCTTCG TCGGATGGCG CGAGCAGGAC GCGCGCGTCC TGCCCCCGGC GTGA
 
Protein sequence
MSKISLEALS KRYGEFRALT DFSLEVASGE FVSLLGPSGS GKTTLLNLIA GMTRPSSGRI 
LIDGLDVTHV PPSKRKLGMV FQNYALMPHM TVFENIAFPL EVRGVGKAEI RRRVGEVLDL
IRMPHVAERR PKELSGGQQQ RISLARCIVY KPALILMDEP LGALDKKLRQ EMQIEISRLH
RESGITMLYV THDQEEALTM SDRIVLMKDG RAAQCGTADE LYFEPNSPYV ADFIGESNLM
PGRIVSQQGS DLTLSLGDVR MTAPRPSFPV EVGEEITLLV RPELAALATA PSPTHPLAGA
LEASLVVGAN VRHVVRLATG ARFLVQEFNH RHREKLEIGV GVFVGWREQD ARVLPPA