Gene M446_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3826 
Symbol 
ID6130231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4264388 
End bp4265545 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content76% 
IMG OID641643994 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001770636 
Protein GI170741981 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGG TGCCGGCGGC GACGGGCCAT CGTACGTTAG AGACCGAGGT ACCCGTGCCC 
GCCGTCACCG TGGTGGTGGC GGCCGAGCGC GAGATCGTCG AGCGCACGGT GGTCACCGGC
ACCCTGGTCC CGCGCGACGA GATCATGGTC TCGCCCGAGA TCGAGGGCTG CCGCATCACC
GAACTCCTGG TCGAGGAGGG GGACCGGGTC GCCAGGGGCG CGGTGCTCGC CCGCCTGTCC
CGGGAGATGA TCGACACCCA GCTCGCCCAG AACGCCGCCG CCATCGCCCG GGCCGAGGCC
GCCGTGGAGC AGGCCCGCAG CACCATCGTG CAGGCCGAGG CGGCGCAGGT CGAGGCGGCC
CTGGCGCTGG AGCGCACCCG GACCCTGATC CGGACCGGCA ACGCGACCGA GGTGCAGATG
GAGCAGCGCA CCTCGGCGGC GCGCTCGGCG GAGGGGCGGC TCGCCGCGGC CCGCAACGGG
CTCTCGATCG CCGAGGCCGA CCTCCTGCAG GCCCGGGCCC AGCGCAAGGA ACTCGACCTC
AAGCTCGCCC GCACGGAGAT CCGCGCGCCC GAGGGCGGCA TCGTCAGCCG CCGCACCGCC
CGGATCGGCG CCACCGCGAG CGCGACCGCC GAGCCGCTGT TCCGGCTGAT CGCCCGCGGC
GAGATCGAAC TCGAGGGCGA GGTGACCGAG ACCGGCATGC CGCGGCTCAA GCCCGGCGCG
CCCGCCCAGC TCGATCTCGA CACGCCGGAC GGGTCCGTCG GCGTGCCGGG CCGCGTGCGC
GCGGTCTATC CGGAGATCGA CCGCGCGACC CGCCTCGGCA AGGTGCGCGT GCGCCTCGAC
CCCGATCCGC GCCTGCGCAT CGGCGCCTTC GCCCGCGGCA GCGTCGAGGT GGCGCGCCGC
ACCGGCGTCG CGGTGCCGGT CGCCTCGGTC GTCTACGGCA ATGGCGGCGC GACCGTCCTC
GTCGTGGCGG GCGACCGGGT CGAGGCGCGC CGGGTCCGCA CCGGCCTCTC GGCGGCGGGC
TTCATCGAGA TCCGCGACGG GGTGCGGGCC GGCGACGCCG TCGTGGCCCG GGCCGGCAGC
TTCCTGCGCG ACGGGGACCG GGTCCGCCCG GTCTTTCCCG CCCAGCAGGT CAGCGCCGAC
GCCCTCCCGC GCCCCTGA
 
Protein sequence
MCLVPAATGH RTLETEVPVP AVTVVVAAER EIVERTVVTG TLVPRDEIMV SPEIEGCRIT 
ELLVEEGDRV ARGAVLARLS REMIDTQLAQ NAAAIARAEA AVEQARSTIV QAEAAQVEAA
LALERTRTLI RTGNATEVQM EQRTSAARSA EGRLAAARNG LSIAEADLLQ ARAQRKELDL
KLARTEIRAP EGGIVSRRTA RIGATASATA EPLFRLIARG EIELEGEVTE TGMPRLKPGA
PAQLDLDTPD GSVGVPGRVR AVYPEIDRAT RLGKVRVRLD PDPRLRIGAF ARGSVEVARR
TGVAVPVASV VYGNGGATVL VVAGDRVEAR RVRTGLSAAG FIEIRDGVRA GDAVVARAGS
FLRDGDRVRP VFPAQQVSAD ALPRP