| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3767 |
|---|
| Symbol | |
|---|
| ID | 6129112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4202601 |
|---|
| End bp | 4203848 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641643936 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001770580 |
|---|
| Protein GI | 170741925 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.102603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.238658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA AACTCTCCTT GCCGAAGGAC AAGATCCGCG TCCTTCTCCT CGAAGGCATC
AACGACAGCG CCGTGTCGCT GCTGAACGCC GCCGGCTACA CCAACGTCAC CCGCCTCGCG
AAGGCGCTCG ACCCGGCGGA CCTGCGCGAG GCGCTCAGGG GCACGCATCT CCTCGGCATC
CGCTCGCGCA CGCAGCTCGA CGAGGGCGCC TTCGAGGCCG CCGACCGGCT GATCGCGGTG
GGCTGCTTCT CGGTCGGCAC CAACCAGGTC GACCTGCAGG CGGCGCGCCG GCGCGGCATC
CCGGTCTTCA ACGCGCCGTT CTCGAACACC CGCTCGGTGG CCGAACTCGT CATCGGCGAG
ATCGTGATGC TGCTGCGCCG CATCGTGCCG CGCTCGGTCT CGGCCCATGC GGGCGGCTGG
GACAAGTCGG CGGCGAATTC CTTCGAGGTG CGCGGCAAGA CGCTCGGCAT CGTCGGCTAC
GGCAATATCG GCTCGCAGCT CTCGAACCTC GCCGAGGCGA TGGGCATGCG GGTGATCTTC
TACGACCTCA CCGACCGCCT GCGCCACGGC AACACCGAGC CGGTCGAGAC CCTCGACGAC
CTGCTCGGCC AGAGCGACGT CGTCTCGCTG CACGTGCCCG AGACGCCCGC CACCCACACC
ATGATCGGCG AGGCGCAGAT CCGGGCGATG AAGCCCGGCG CCTACCTGAT CAACAACAGC
CGCGGCACCG TGGTCGACCT CGACGCGCTC GCGGGCGCGC TGCGCGACGG CCACCTGCGC
GGCGCGGCGG TCGACGTCTT CCCGGTCGAG CCGAAATCGA ACCAGGAGCG CTTCGTCTCG
CCGCTCCAGG GCCTTGAGAA CGTGATCCTG ACGCCGCATG TCGGCGGCTC GACCGAGGAG
GCGCAGGAGC GGATCGGCGC CGAGGTGGCG CGCAAGCTCG TCGACTACTC GGATATCGGC
TCGACGTTCG GCGCGGTGAA TTTTCCGCAG GTTCAGCTCG CCGCGAGGCC GCTCGGCACG
CGCTACATCC ACGTCCAGCG CAACATCCCG GGCATGCTGC GGCGCCTGAA CGACGTCTTC
GCGCGCCAGG GCATCAACAT CGCGGCGCAA TTCTACCAGA CCGACGGCGA GGTCGGGTAC
GTGGTGATCG AGACCGACGC GGTGGAGGGC GACGCCGAGG CGCTGCTGGA GGAGATCCGG
CAGCTCGAGG GCACGATCCG GGCGCGGCTC CTCTACGAGC GCCGCTGA
|
|---|
| Protein sequence | MADKLSLPKD KIRVLLLEGI NDSAVSLLNA AGYTNVTRLA KALDPADLRE ALRGTHLLGI
RSRTQLDEGA FEAADRLIAV GCFSVGTNQV DLQAARRRGI PVFNAPFSNT RSVAELVIGE
IVMLLRRIVP RSVSAHAGGW DKSAANSFEV RGKTLGIVGY GNIGSQLSNL AEAMGMRVIF
YDLTDRLRHG NTEPVETLDD LLGQSDVVSL HVPETPATHT MIGEAQIRAM KPGAYLINNS
RGTVVDLDAL AGALRDGHLR GAAVDVFPVE PKSNQERFVS PLQGLENVIL TPHVGGSTEE
AQERIGAEVA RKLVDYSDIG STFGAVNFPQ VQLAARPLGT RYIHVQRNIP GMLRRLNDVF
ARQGINIAAQ FYQTDGEVGY VVIETDAVEG DAEALLEEIR QLEGTIRARL LYERR
|
|---|
| |