| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3739 |
|---|
| Symbol | |
|---|
| ID | 6133580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4171901 |
|---|
| End bp | 4173742 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641643909 |
|---|
| Product | glycoside hydrolase 15-related |
|---|
| Protein accession | YP_001770553 |
|---|
| Protein GI | 170741898 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.788382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.163243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGC GGATCGAGGA TTACGCCCTG GTGGGCGACG GGCGCAGCGC GGCCCTGATC
GGCCGCGACG GCAGCATCGA CTGGCTGTGC TGGCCTCGCT TCGACGCGCC CGCCTGCTTC
GCCGCCCTCC TCGGCACGGC CGAGCACGGC CATTGGCGCA TCGCCCCGGC CGGCCCGGCG
ACCCGCGTCA CCCGCTGCTA CAGGCCTGGC ACCCTGGTGC TGGAGACCAC GCACGAGACC
GAGGCCGGCA CGATCCGCGT CACCGACTAC ATGCCGAGCG ACGACGGGCT CCACCTCGTG
CGCCTCGTCG AGGGGGTGAG CGGGTCGGTC CCGGTCCGCA TGGAATTCGT GGTGCGCTTC
GATTACGGCT CGGCGGTGCC CTGGGTCTCG CGCAACGAGC ACGACGACCT GCGGGCGATC
GTCGGCCCGC ACAAGGTCGT GCTGCGCACG AAGGCGCCCC TGCGGGGCGT CGGGCGCAGC
ACCGTCTCGG ACTTCACCCT CGCGCAGGGG GAGTGCCTGT CCTTCGTGCT GAGCTACGCC
CCCTCCGCCG AGGACGACCC CGCCCCGATC GAGCCGCGCA AGGTCCTGCG CCGCACCACC
GACGCCTGGC GCTCCTGGTC GAGCCGCTGC CAGGGCGGCA CGCCCTGGGA CGACATCCTG
CTGCGCTCGC TCCTCACTCT CAAGGCGCTG ATCTACGCGC CCACGGGCGG GATCGTGGCG
GCGCCGACCA CCTCCCTGCC GGAGGCGCTC GGCGGGGTGC GCAACTGGGA TTACCGGTAC
TGCTGGCTGC GGGATTCGAC CTTCACGCTC CTCGCCCTGG TGGATGCGGG CTACCTCGAC
GAGGCGCGGG CGTGGCGCGA CTGGCTCCTG CGCGCGGTCG CGGGCAGCCC GGAACAGGCC
CGCATCCTCT ACGGCATCGC CGGGGAGCGG CTCTTGCCCG AGATCGAGAT CGACTGGCTG
CCGGGCTACG AGGGCTCGCG GCCGGTGCGC ATCGGCAACG CCGCCTCGCA GCAATTCCAG
CTCGACGTCT ACGGCGAGAT CTTCGACGCG CTCTACCAGG CCGAGGAGCG CGGCATGGAG
GGGGACGATA ACGGCGTGCG GGTCGGCCTC GCCCTCCTGG CCCACCTGGA GAAGGTCTGG
ACCGAGCCGG ACGAGGGCAT CTGGGAGGTT CGGGGCGGGC GGCGCCACTT CGTGCACTCG
AAGGTGATGG CCTGGGTGGC CTTCGACCGG GCAGTGCGGT TCTACGAGCG GCTGAACGGG
GACGGCGCCG GGGATGCCAC CGTGGCGCGC TGGCGCGACG TGCGCGCGCG CATCCACGCG
CAGGTCTGCG AGAGGGGCTT CGACCCGGAG CTCAACAGCT TCGTGCAATC CTACGGCTCC
AAGCGCCTCG ACGCGAGCCT GCTCCTGATC GCCCATGTGG GCTTCCTGCC CCACCACGAC
CCGCGGGTGG TCGGCACCGT CGAGGCGATC GGCCGCGACC TGATGCGCGA CGGCTTCATC
CTGCGCTACG ACACCGAGAA CCAGACCACG GACGGCCTCC CGGCCGGCGA GGGTGCCTTC
CTGCCCTGCA GCTTCTGGTA CGCGGACAAC CTGATCCGCC TCGGGCGCTG CGCGGAGGCC
CGGGCGATGA TCGAGCGGCT CCTCGCCGCC TGCAACGACG TGGGGCTGCT CGCCGAGGAG
TACGACCCGG TCGCCAAGCG CCAAGTCGGC AACTTCCCGC AGGCCTTCAG CCACGTCGCC
CTGGTCAACA CACTTCTGAA CTTCAGTCGC GCGGTCGGAC CCGCTATGGA GCGCAGCGAC
GACGAGGGGC GCGGCGCTGC CGGCGCGACC GCCCGCACCT GA
|
|---|
| Protein sequence | MASRIEDYAL VGDGRSAALI GRDGSIDWLC WPRFDAPACF AALLGTAEHG HWRIAPAGPA
TRVTRCYRPG TLVLETTHET EAGTIRVTDY MPSDDGLHLV RLVEGVSGSV PVRMEFVVRF
DYGSAVPWVS RNEHDDLRAI VGPHKVVLRT KAPLRGVGRS TVSDFTLAQG ECLSFVLSYA
PSAEDDPAPI EPRKVLRRTT DAWRSWSSRC QGGTPWDDIL LRSLLTLKAL IYAPTGGIVA
APTTSLPEAL GGVRNWDYRY CWLRDSTFTL LALVDAGYLD EARAWRDWLL RAVAGSPEQA
RILYGIAGER LLPEIEIDWL PGYEGSRPVR IGNAASQQFQ LDVYGEIFDA LYQAEERGME
GDDNGVRVGL ALLAHLEKVW TEPDEGIWEV RGGRRHFVHS KVMAWVAFDR AVRFYERLNG
DGAGDATVAR WRDVRARIHA QVCERGFDPE LNSFVQSYGS KRLDASLLLI AHVGFLPHHD
PRVVGTVEAI GRDLMRDGFI LRYDTENQTT DGLPAGEGAF LPCSFWYADN LIRLGRCAEA
RAMIERLLAA CNDVGLLAEE YDPVAKRQVG NFPQAFSHVA LVNTLLNFSR AVGPAMERSD
DEGRGAAGAT ART
|
|---|
| |