Gene M446_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3682 
SymbolrpsP 
ID6135707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4107251 
End bp4107610 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content72% 
IMG OID641643853 
Product30S ribosomal protein S16 
Protein accessionYP_001770497 
Protein GI170741842 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.442815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00533118 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCTGA AGATCCGCCT GACCCGCGGC GGCGCCAAGA AGCGCCCCTA TTACCGCATC 
GTCGTCGCCG ATTCGCGCTC GCCGCGCGAC GGCCGCTTCA TCGAGAAGGT CGGCGTGTAC
GACCCGATGA AGCCGAAGGA CGACCCGGCC CGCGTGTCGC TCGAATCCGA GAAGATCCAG
GCGTGGCTGG CCAAGGGCGC GCAGCCGACC GACCGCGTCC TGCGCTTCCT CGACGCCGCC
GGCCTCGCCA AGCGCCCGGC CCGCAACAAC CCGAAGAAGG CCGAGCCGGG CCAGAAGGCC
AAGGAGCGCG CCGCCGCCCG CGCCGAGAAG GCCGGCGCCG GCGACGACGC CGCGGCGTAA
 
Protein sequence
MSLKIRLTRG GAKKRPYYRI VVADSRSPRD GRFIEKVGVY DPMKPKDDPA RVSLESEKIQ 
AWLAKGAQPT DRVLRFLDAA GLAKRPARNN PKKAEPGQKA KERAAARAEK AGAGDDAAA