Gene M446_3681 details

Gene Information

• Locus tag: M446_3681
• Symbol: rimM
• ID: 6135706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium sp. 4-46
• Kingdom: Bacteria
• Replicon accession: NC_010511
• Strand: -
• Start bp: 4106614
• End bp: 4107144
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 641643852
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001770496
• Protein GI: 170741841
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.0131034
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCTCGGCG AGTTCGGCCG CGCGCACGGC CTCCAGGGCG AGGTGCGGCT GAAATCCTAT 
ACCGCCGAGC CGATGGCGAT CGGCGGCTAC GGGCCGCTCC TCGCCTCCGA CGGCCGCGTG 
GTGGAGTTGA CGGCGCTGCG CCCCGCCGCG GGAACGCCCG ACATCCTGGT GGCGCGGGTG 
GCCGGCGTCG CGGGCCGCAG CGCGGCCGAG GGCCTCAACC GCCTCACCCT CTCGGTGCCC 
CGGGACCGCC TCGGCGCGCC CGAGGACGAG GACGAGTTCT TCACCGCCGA CCTCGTCGGT 
CTCGCCGCGG TGGATGCGGC GGGCACGCGG CTCGGCACGA TCCGGGCGGT GCCGAATTAC 
GGCGGCGGCG ACCTCCTGGA GATCGAGCCC GAGGGCGGCG GACGCCCGGC CCTCCTGCCC 
TTCACCCGCC TCTTCGTGCC GAAGGTCGAG ATCGCGGCCG GCCGCGTGAC GATCGCGCCG 
CCCGAGGATC TCTTCGCCCC GCCCGGCCCG CCGCCGGAGG GCGAGGGCTG A 

 

Protein sequence

MLGEFGRAHG LQGEVRLKSY TAEPMAIGGY GPLLASDGRV VELTALRPAA GTPDILVARV 
AGVAGRSAAE GLNRLTLSVP RDRLGAPEDE DEFFTADLVG LAAVDAAGTR LGTIRAVPNY 
GGGDLLEIEP EGGGRPALLP FTRLFVPKVE IAAGRVTIAP PEDLFAPPGP PPEGEG