| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3664 |
|---|
| Symbol | |
|---|
| ID | 6132784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4088105 |
|---|
| End bp | 4090807 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641643835 |
|---|
| Product | aconitate hydratase 1 |
|---|
| Protein accession | YP_001770479 |
|---|
| Protein GI | 170741824 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.183384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00133985 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCTTCCA TCGACAGCTT CAAATCCCGT CAGACCCTGC AGATCGGCGC GAAGGCTTAC
GCCTACTACT CCATCCCTGA GGCCGAGAAG AACGGCCTGC CGGACGCGGG CCGGCTGCCC
TTCTCGATGA AGGTGCTGCT GGAGAACCTG CTGCGCTTCG AGGACGACCG CTCCGTCAAG
CGGGCCGACA TCGAGGCCGT GACCGCCTGG CTCGACAACC GCGGCAAGGT CGAGACCGAG
ATCGCCTTCC GGCCCTCGCG CGTGCTGATG CAGGACTTCA CCGGCGTGCC GGCCGTGGTC
GACCTCGCGG CCATGCGCGA CGCCATGGTG GCGCTCGGCG GCGACCCGAA GAAGATCAAC
CCGCTCGTGC CGGTCGATCT CGTCATCGAC CACTCCGTGA TCGTGGACGA GTTCGGCACC
CCGAAGGCGC TGGCCGACAA CGTCGCCCTC GAATACGAGC GCAACGGCGA GCGCTACACC
TTCCTCAAGT GGGGCCAGAC GGCGTTCGAC AACTTCTCCG TGGTGCCGCC CGGCACCGGC
ATCTGCCACC AGGTCAACCT CGAGTACCTC GCCCAGACGG TCTGGACCAA GGCCTTCGAG
AACGGGCAGG AACTGGCCTA TCCGGACAGC CTCGTCGGCA CCGATTCGCA CACCACGATG
GTGAACGGCC TGGCGGTGCT GGGCTGGGGC GTCGGCGGCA TCGAGGCCGA GGCGGCGATG
CTCGGCCAGC CGCTCTCGAT GCTGATCCCC GAGGTGGTCG GCTTCAAGCT CTCGGGCAAG
CTGCCGGAGG GCACCACCGC CACCGACCTC GTGCTGACCG TCACCCAGAT GCTGCGCAAG
AAGGGCGTGG TCGGCAAGTT CGTGGAGTTC TACGGCCCCG GCCTCGACGA CATGGCGGTG
GCCGACCGCG CCACGATCTC CAACATGGCG CCCGAATACG GCGCGACCTG CGGCTTCTTC
CCGGTCGACG CCAAGACCAT CGACTTCCTG AAGGTCACCG GCCGCGCCGA CGAGCGCATC
GCGCTGGTCG AGGCCTACGC CAAGGCGCAG GGGATGTGGC GCGACGCCGC GACCCCCGAC
CCGGTCTTCA CCGACACGCT GGAACTCGAC CTCGCCGACG TGAAGCCCTC GCTCGCCGGC
CCCAAGCGCC CGCAGGACCG GGTGCTGCTC GATTCCGCCA AGGCCGGCTT CGCCGCCTCG
ATGGAGAGCG AGTTCCGCAA GGCCGCCGAC ATCGCCAAGC GCTACCCGGT CGAGGGCGCC
AATTTCGACA TCGGCCACGG CGACGTGGTG ATCGCGGCGA TCACCTCCTG CACCAACACC
TCGAACCCGA GCGTGATGAT CGGGGCGGGG CTGCTCGCCC GCAACGCCGT CGCCAAGGGC
CTGCGCTCGA AGCCCTGGGT GAAGACCTCG CTCGCCCCCG GCTCGCAGGT CGTCGCCGAG
TACCTGGAGA AGGCCGGGCT GCAGCAGAGC CTCGACGCGC TCGGCTTCAA CCTCGTCGGC
TTCGGCTGCA CCACCTGCAT CGGCAATTCC GGCCCGCTGC CGGCGCCGAT CTCCAAGGCG
ATCAACGACA ACGACGTGGT CGCGGCCGCC GTGCTGTCGG GCAACCGCAA CTTCGAGGGC
CGGGTGAATC CGGACGTGCG GGCGAACTAC CTCGCCTCGC CGCCCCTCGT CGTCGCCTAC
GCGCTCGCCG GCTCGCTCCA GGTCGACCTG ACCCGGGAGC CGCTCGGCAC CGGCTCGGAC
GGCAAGCCGG TCTACCTGAA GGACATCTGG CCGTCCTCGG CGGAGGTGAA CGCCTTCATC
GAGCAGACCA TCACCTCCGC CCTGTTCAAG AGCCGCTACG CCGACGTGTT CGGCGGCGAC
GCGAACTGGA AGGCGGTCGA GGTGACCCCG GCCCAGACCT TCCAGTGGAA TTCCGGCTCC
ACCTACGTGC AGAACCCGCC CTACTTCGTG GGCATGGAGA AGACCCCGGC GCCGGTCACC
GACATCGTCG GCGCCCGCAT CCTCGGGCTG TTCCTCGACT CGATCACCAC CGACCACATC
TCGCCCGCGG GCAACATCCG GGCGGCCTCG CCGGCCGGCG CCTACCTGCA GGAGCATCAG
GTCCGGGTGC AGGACTTCAA CCAGTACGGC ACGCGGCGCG GCAACCACGA AGTCATGATG
CGGGGCACCT TCGCCAACAT CCGCATCAAG AACCAGATGG TCCGCGACGC GTCCGGCACG
GTGGTGGAGG GCGGCTGGAC CCTCTACCAG CCTACGGCTG AGAAGATGTT CATCTACGAC
GCGGCGATGC GCTACCAGCA GGAGGGCACG CCGCTGGTCG TGTTCGCCGG CAAGGAATAC
GGCACCGGCT CGTCGCGCGA CTGGGCGGCC AAGGGCACGA AGCTGCTCGG GGTGCGGGCG
GTCATCGCCG AGAGCTTCGA GCGCATCCAC CGCTCGAACC TCGTCGGCAT GGGCGTGGTG
CCGCTGGTCT TCCAGGGCGA CACGACCTGG GCCTCCCTCG GCCTCAAGGG CGACGAGACC
GTGACGATCC GCGGCCTCGC CGGGGAGCTG AAGCCGCGCC AGACCCTGGT GGCGGAGATC
ACCGGGGCGG ACGGCGCGAC CCGGGAGGTG CCGCTCACCT GCCGGATCGA CACCCTCGAC
GAGCTGGAAT ACTTCCGCAA CGGCGGCATC CTTCCCTACG TGCTGCGCCA GCTCGCGGCG
TGA
|
|---|
| Protein sequence | MASIDSFKSR QTLQIGAKAY AYYSIPEAEK NGLPDAGRLP FSMKVLLENL LRFEDDRSVK
RADIEAVTAW LDNRGKVETE IAFRPSRVLM QDFTGVPAVV DLAAMRDAMV ALGGDPKKIN
PLVPVDLVID HSVIVDEFGT PKALADNVAL EYERNGERYT FLKWGQTAFD NFSVVPPGTG
ICHQVNLEYL AQTVWTKAFE NGQELAYPDS LVGTDSHTTM VNGLAVLGWG VGGIEAEAAM
LGQPLSMLIP EVVGFKLSGK LPEGTTATDL VLTVTQMLRK KGVVGKFVEF YGPGLDDMAV
ADRATISNMA PEYGATCGFF PVDAKTIDFL KVTGRADERI ALVEAYAKAQ GMWRDAATPD
PVFTDTLELD LADVKPSLAG PKRPQDRVLL DSAKAGFAAS MESEFRKAAD IAKRYPVEGA
NFDIGHGDVV IAAITSCTNT SNPSVMIGAG LLARNAVAKG LRSKPWVKTS LAPGSQVVAE
YLEKAGLQQS LDALGFNLVG FGCTTCIGNS GPLPAPISKA INDNDVVAAA VLSGNRNFEG
RVNPDVRANY LASPPLVVAY ALAGSLQVDL TREPLGTGSD GKPVYLKDIW PSSAEVNAFI
EQTITSALFK SRYADVFGGD ANWKAVEVTP AQTFQWNSGS TYVQNPPYFV GMEKTPAPVT
DIVGARILGL FLDSITTDHI SPAGNIRAAS PAGAYLQEHQ VRVQDFNQYG TRRGNHEVMM
RGTFANIRIK NQMVRDASGT VVEGGWTLYQ PTAEKMFIYD AAMRYQQEGT PLVVFAGKEY
GTGSSRDWAA KGTKLLGVRA VIAESFERIH RSNLVGMGVV PLVFQGDTTW ASLGLKGDET
VTIRGLAGEL KPRQTLVAEI TGADGATREV PLTCRIDTLD ELEYFRNGGI LPYVLRQLAA
|
|---|
| |