| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3663 |
|---|
| Symbol | |
|---|
| ID | 6132783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4087069 |
|---|
| End bp | 4087707 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 641643834 |
|---|
| Product | heme exporter protein CcmA |
|---|
| Protein accession | YP_001770478 |
|---|
| Protein GI | 170741823 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.666894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00457456 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTGA TCGCCGAGGG GCTCGCCTGC CGCCGCTCGG GGCGGCGCAT CTTCTCCGGC
CTCTCCTTCG CCCTCGGCCC CGGCGAGGCG CTGGTCGTGA CGGGCCGCAA CGGCGCGGGC
AAGTCCACCC TGCTCGCCCT CGTCTCCGGG CGTCTCGCGC CGGAGGCCGG GCGGCTGCGC
GCGGAGGATG TCGGCGAGCG CACGATCCCC GAATGCCTGC ACGGGGTCGG CCACCGGGAC
GGGCTCAAGA GCGCGCTCAC CGCCGAGGAG AACCTCGCCT TCGCCCGCGA CCTCCTCGGC
GAGGCGGCGC TGTCGCCCCG CGAGGCGCTC GGCCGGATGG GGCTCGCCCA CGCGGCGGGC
CTGCCGGTCG CCTACCTGTC GGCCGGGCAG CGGCGGCGGG TCGCGCTCGC GCGGCTCCTC
GTCTGCCGCC GCCCGCTCTG GCTCCTCGAC GAGCCGACCG CCGCCCTCGA CGTCGCCTCG
CAGGGCATCC TCGCCGCGCT GATGCGCGCC CACCTGCGCG AGGGCGGCCT CGTGATCGCG
GCGACCCACC AGGCGCTCGG GCTCGAGGGC GCCCGCGAGA TCGCCATCGA GGCCCATCGC
CCGGCGCGCC TCGACCCCCT CGCCGAGGCC GCCCGATGA
|
|---|
| Protein sequence | MRLIAEGLAC RRSGRRIFSG LSFALGPGEA LVVTGRNGAG KSTLLALVSG RLAPEAGRLR
AEDVGERTIP ECLHGVGHRD GLKSALTAEE NLAFARDLLG EAALSPREAL GRMGLAHAAG
LPVAYLSAGQ RRRVALARLL VCRRPLWLLD EPTAALDVAS QGILAALMRA HLREGGLVIA
ATHQALGLEG AREIAIEAHR PARLDPLAEA AR
|
|---|
| |