| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3660 |
|---|
| Symbol | |
|---|
| ID | 6132780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4085308 |
|---|
| End bp | 4086072 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641643831 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | YP_001770475 |
|---|
| Protein GI | 170741820 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.38552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00533118 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG GCCTCCTCAC CCGGCTCGCG CAGCCGAGCC ACTTCATGCG CTGGTCGGGC
GCCGCCCTGC CCTGGCTCGG CGGCCTCAGC GCCGTGCTGC TGGCCGCGGG CCTCTACCTG
TCGTTCTTCG TCGCGCCCGC CGATTACCAG CAGGGCGAGA CGGTGCGGAT CATGTTCCTG
CACGTGCCGG CCGCGTGGCT CGGCGTGTTC TTCTACGGGG CGATGACGGT CTCGGCGCTC
GGCACGCTGG TCTGGCGCCA CCCGCTGGCC GACGTGGCGC AGCGCGCCGC CGCCCCGATC
GGCGCCGCCT TCACGCTGAT CTGCCTCGTC ACCGGCTCGC TCTGGGGCAA GCCGATGTGG
GGCACCTACT GGGTCTGGGA CGCGCGCCTG ACCTCGATGC TGGTGCTGCT GCTGATCTAT
TGCGGGCTGC TCGCGCTGTG GCGCACCATC GAGGATCCGG GCCGGGCCGC CCGGGCGGTG
GCGATCCTCA CCCTGGTCGG CGCCGTCAAC CTGCCGATCA TCAAGTTCTC GGTGAACTGG
TGGTCGACGC TGCACCAGCC GGCCTCGATC CTGCGGATGG GTGGGCCGAC CATCCACCCG
ACCATGCTCT ACCCGCTGCT GGTGATGATC GCGGCCTTCT CGGTGCTCGG GATCACGCTG
CACCTCGCGA CGATGCGCAC CGAGATCCTG CGCCGCCGGG TGCGGACGCT GGCGATCCTC
GAAGCGGAGC GGCTCGACGC CGTGCCGACG CCCCAAATCG CCTGA
|
|---|
| Protein sequence | MAQGLLTRLA QPSHFMRWSG AALPWLGGLS AVLLAAGLYL SFFVAPADYQ QGETVRIMFL
HVPAAWLGVF FYGAMTVSAL GTLVWRHPLA DVAQRAAAPI GAAFTLICLV TGSLWGKPMW
GTYWVWDARL TSMLVLLLIY CGLLALWRTI EDPGRAARAV AILTLVGAVN LPIIKFSVNW
WSTLHQPASI LRMGGPTIHP TMLYPLLVMI AAFSVLGITL HLATMRTEIL RRRVRTLAIL
EAERLDAVPT PQIA
|
|---|
| |