| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3602 |
|---|
| Symbol | |
|---|
| ID | 6132912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4016320 |
|---|
| End bp | 4017816 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641643769 |
|---|
| Product | nitrogenase cofactor biosynthesis protein NifB |
|---|
| Protein accession | YP_001770417 |
|---|
| Protein GI | 170741762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.95628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.038494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCC CGGTGTTCTC CCTCGAGGCC CTCGTCTCGG CACCGATCTC GGTCGACGCG
ATGCGGGCGA AACTGCAGGA GGGCGGCTGC TCGTCCACGT CCTGCGGCTC CTCGGCCAAG
CCGGACGAGA TGCCCGAGGA CGTCTGGGAC AAGATCAAGG ATCATCCCTG CTACTCGGAA
GAGGCGCATC ACTACTTCGC CCGCATGCAC GTCGCGGTGG CGCCGGCCTG CAACATCCAG
TGCAATTACT GCAATCGCAA GTACGATTGC GCCAACGAGA GCCGGCCCGG CGTGGTGTCG
GAGAAGCTCA CGCCGGACCA GGCCCTGCGC AAGGTGGTGA CGGTGGCCAA CGAGGTGCCG
CAGCTGTCGG TGCTCGGCAT CGCCGGCCCC GGCGACAGCT GCTACGATTG GAAGAAGACC
AAGGCCACCT TCGACGCGGT GTCCCGGGAG ATCCCCGACA TCAAGCTCTG CCTCTCCACC
AACGGGCTCG CCCTGCCCGA CCACGTCGAC GAGATCGCCG AGATGAACGT CGATCACGTC
ACGGTGACCA TCAACATGGT CGATCCGGAG ATCGGGGCGA AGATCTATCC CTGGATCTTC
CACCAGCACA AGCGCTACAC GGGCGTCGAG GCCGCCCGCA TCCTGCACGA GCGGCAGATG
CTGAGCCTGG AGATGCTGCG CGACCGCGGC ATCCTGGTGA AGGTGAACTC GGTCATGATC
CCCGGGATCA ACGACGAGCA CCTGCTCGAC GTGAACGCGT GGGTGAAGGA GCGGGGCGCC
TTCCTGCACA ACGTGATGCC GCTGATCTCG GCGCCCGAGC ACGGCACGCA TTTCGGCCTG
ACCGGCCAGC GCGGCCCGAC CGCCATGGAG CTGAAGGCCC TGCAGGACAA GCTGGAGGGC
GGCGCCAAGC TGATGCGCCA CTGCCGCCAG TGCCGGGCCG ACGCGGTCGG GCTCCTCGGC
GAGGATCGCG GCCAGGAATT CACCCTCGAC CAGCTGCCCG CGCAGATCCG CTACGATCCG
AGCAAGCGCG CCGCCTACCG GGAGGTCGTG GCGCACGAGC GCGGCGACCA CCAGGTCAAC
AAGCAGGCCG TGGTGGCGCA GCTCAGGGCG CTCGGGGCGG AGCAGACGCT CCTCGTCGCG
GTCGCCACCA AGGGCGGCGG CCGGATCAAC GAGCATTTCG GCCACGCCAA GGAGTTCCAG
GTCTACGAGG CGGGCCCGGG CGGCGTGACC TTCGTCGGCC ACCGCAAGGT CGACTCCTAC
TGCCTGGGCG GATTCGGCGA GGACGCGACG CTCGACGGCG TAATCGCCGC GCTGGAGGGG
GTCGAGGTCG TCCTCTGCGC CAAGATCGGC GATTGCCCGA AGGAGAGCCT GGAGGCCGCC
GGCATCCGCG CCACCGACCG CTACGCCCTC GACTACATCG AGGCGGCGAT CGGCGCGGTC
TACGCGGAGC AGTTCGGCCG CCGCGTCACC GACGCGCCGC TGATGCTCTC GGCCTGA
|
|---|
| Protein sequence | MSSPVFSLEA LVSAPISVDA MRAKLQEGGC SSTSCGSSAK PDEMPEDVWD KIKDHPCYSE
EAHHYFARMH VAVAPACNIQ CNYCNRKYDC ANESRPGVVS EKLTPDQALR KVVTVANEVP
QLSVLGIAGP GDSCYDWKKT KATFDAVSRE IPDIKLCLST NGLALPDHVD EIAEMNVDHV
TVTINMVDPE IGAKIYPWIF HQHKRYTGVE AARILHERQM LSLEMLRDRG ILVKVNSVMI
PGINDEHLLD VNAWVKERGA FLHNVMPLIS APEHGTHFGL TGQRGPTAME LKALQDKLEG
GAKLMRHCRQ CRADAVGLLG EDRGQEFTLD QLPAQIRYDP SKRAAYREVV AHERGDHQVN
KQAVVAQLRA LGAEQTLLVA VATKGGGRIN EHFGHAKEFQ VYEAGPGGVT FVGHRKVDSY
CLGGFGEDAT LDGVIAALEG VEVVLCAKIG DCPKESLEAA GIRATDRYAL DYIEAAIGAV
YAEQFGRRVT DAPLMLSA
|
|---|
| |