| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3587 |
|---|
| Symbol | |
|---|
| ID | 6134188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4003979 |
|---|
| End bp | 4004746 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641643754 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001770402 |
|---|
| Protein GI | 170741747 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.100685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC TCGTCCAGGC GGCCTGCGCG GCCCTCGCGC TCGCCCTCGC GGGGCCGGCC
GGGGCCCAGA CCGCCCTGAA GGTCGGCTCG ACGCCGACCG GCATCCCCTT CACCTTCCTG
GACACCAAGA CCAACTCCAT CCAGGGCGTC ATGGTCGACG TCATCACGGC CGTCGGGCGC
GAGGCCGGCT TCACGGTCCA GGTCGAGCCC CTGCAATTCT CCACCCTCAT CGCCGCACTC
AACGCCAAGA AGATCGACAT CATCTCGGCC GCGATGTTCA TCACGCCGCC CCGCAAGGAG
GTGATCGACT TCTCCGCCCC GGTCTACACC TACGGCGAGG GGATGATCGT GGCGAAGGGC
GACACCAAGG ACTATACCGG CTTCGCCGAC CTGAAGGGCG AGACGGTGGG GGCGCAGGTC
GGCACCGCCT TCGTGGAGCC CCTCAAGAAA TCCGGCCTGT TTTCCGAGGT GAAGATCTAC
GACACGATCC CCGACATCCT GCGCGACGTG AATTCCGGCC GGCTCAAGGC CGGCTTCGCG
GACGGGCCGA TCCTGGCCTA CAACCTCAAG CTCGGCCTGT TCCCGAACGT GCGCCTGGTC
GACAGCTACA AGCCGACCGT CGTCGGCTCG GTCGGGATCG GCCTGCGCAA GGAGGATAGG
GACCTGCGGG AGAAGATCGA CGCGGCCCTC GCCAGGATCA AGGAGAGCGG CGAACTCGCC
CGGATCCTGG ACAAGTGGGG TCTGAAGCCG TCCGCGAACC CGTCCTGA
|
|---|
| Protein sequence | MKRLVQAACA ALALALAGPA GAQTALKVGS TPTGIPFTFL DTKTNSIQGV MVDVITAVGR
EAGFTVQVEP LQFSTLIAAL NAKKIDIISA AMFITPPRKE VIDFSAPVYT YGEGMIVAKG
DTKDYTGFAD LKGETVGAQV GTAFVEPLKK SGLFSEVKIY DTIPDILRDV NSGRLKAGFA
DGPILAYNLK LGLFPNVRLV DSYKPTVVGS VGIGLRKEDR DLREKIDAAL ARIKESGELA
RILDKWGLKP SANPS
|
|---|
| |