Gene M446_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3582 
Symbol 
ID6134183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp3999288 
End bp4000277 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content71% 
IMG OID641643749 
ProductFe-S cluster assembly protein NifU 
Protein accessionYP_001770397 
Protein GI170741742 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR02000] Fe-S cluster assembly protein NifU 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.370448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0119473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGACT ATTCCGACAA GGTCAAGGAC TACTTCTTCA ATCCGAAGAA TGCGGGCCTG 
CTCGCGGAGG CGAACGCGGT CGGCGAGGTC GGGGCGATCG CCTGCGGCGA CGCGCTCAAG 
CTGATGCTCA AGGTCGATCC GGAGACGGAG GTGATCACCG AGGCCAAGTT CCAGACCTTC 
GGCTGCGGCT CGGCCATCGC CTCCTCCTCG GCGCTGACCG AGATCGTCAT CGGCAAGACG 
GTCGACGAGG CGCTGGCCAT CAGCAACCAG GACATCGCGG ATTTCCTCGG CGGCCTGCCG 
CCCGAGAAGA TGCACTGCTC GGTGATGGGC TACGAGGCGC TGCAGGCCGC GGTCGCCCAT 
TACCGCGGCG AGACGGTCGA GGACGACCAT GAGGAGGGCG CCCTCGTCTG CAAGTGCTTC 
GGCGTCGACG AGGGCATGAT CGAGCGGGCG GTGCGCGCCA ACGGCCTGAC CACGCCCGAG 
CAGGTCACCT TCTACACCAA GGCGGGCGGC GGCTGCCTGA CCTGCTTCGA GGCGATCGAG 
GGCACGCTCG CCCGCGTCAA CCGGGAGATG GTCGAGGCCG GCCTGCTCGC GGCGGGCGCC 
GCTTACCGGA TCGGGGCGGC GGATCCCCGC AGCCTGAAGA GCAAGCCCCG GCTCGCCCAG 
GCATTCGGGG ATCCCCCGGC GCCGGGCGCC AGTGCGGCGC CGGGCGCCGG CACCAGGGCG 
TTCCCCTCGC CCCAGAGCCC GCTCGCGCCC GCCGCGCTCA CCCCGATGCA GCGCATCCGG 
CTGATCGACA AGGCGATCGA GGCGTTGCGG CCCGTGCTCC AGCGCGACGG GGGCGACTGC 
GAACTCGTCG AGGTGGAGGG CACCGTGGTG AGCGTGCGGC TCTCGGGCGC CTGCGTCGGC 
TGCCAGATGG CGAGCGTCAC CGTGGCGGGC GTGCAGCAGC GCCTGATCGA GGCCCTCGGC 
CTCCCGCTCC GGGTCGTCCC GGTGAAGTAG
 
Protein sequence
MWDYSDKVKD YFFNPKNAGL LAEANAVGEV GAIACGDALK LMLKVDPETE VITEAKFQTF 
GCGSAIASSS ALTEIVIGKT VDEALAISNQ DIADFLGGLP PEKMHCSVMG YEALQAAVAH 
YRGETVEDDH EEGALVCKCF GVDEGMIERA VRANGLTTPE QVTFYTKAGG GCLTCFEAIE 
GTLARVNREM VEAGLLAAGA AYRIGAADPR SLKSKPRLAQ AFGDPPAPGA SAAPGAGTRA 
FPSPQSPLAP AALTPMQRIR LIDKAIEALR PVLQRDGGDC ELVEVEGTVV SVRLSGACVG 
CQMASVTVAG VQQRLIEALG LPLRVVPVK